RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 SLC8B1Q6J4K2 584 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 ANKS3Q6ZW76 656 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 RALGPS2Q86X27 583 aaPredicted RBP15.96■□□□□ 0.15
VPS29-209ENST00000551655 NOSTRINQ8IVI9 506 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 EXOC8Q8IYI6 725 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 DYDC2Q96IM9 177 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 HHIPQ96QV1 700 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 GPSM3Q9Y4H4 160 aa15.96■□□□□ 0.15
VPS29-209ENST00000551655 SPAARA0A1B0GVQ0 90 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 BCLAF3A2AJT9 711 aaKnown RBP15.95■□□□□ 0.14
VPS29-209ENST00000551655 ATF2P15336 505 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 CSRP1P21291 193 aaKnown RBP15.95■□□□□ 0.14
VPS29-209ENST00000551655 FCHO2Q0JRZ9 810 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 PPP2R5CQ13362 524 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 COL28A1Q2UY09 1125 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 ADCK5Q3MIX3 580 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 C4orf19Q8IY42 314 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 TCEAL8Q8IYN2 117 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 PDZD7Q9H5P4 517 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 TMEM9BQ9NQ34 198 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 FOXD4L1Q9NU39 408 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 DDX25Q9UHL0 483 aaKnown RBP15.95■□□□□ 0.14
VPS29-209ENST00000551655 SLC8A2Q9UPR5 921 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 INVSQ9Y283 1065 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 GDAQ9Y2T3 454 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 MSRB2Q9Y3D2 182 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 PPME1Q9Y570 386 aa15.95■□□□□ 0.14
VPS29-209ENST00000551655 ASCC3Q8N3C0 2202 aaKnown RBP15.95■□□□□ 0.14
VPS29-209ENST00000551655 A0A1W2PRU2 124 aa15.94■□□□□ 0.14
VPS29-209ENST00000551655 CYSRT1A8MQ03 144 aa15.94■□□□□ 0.14
VPS29-209ENST00000551655 TMEM189-UBE2V1I3L0A0 370 aa15.94■□□□□ 0.14
VPS29-209ENST00000551655 AKAP3O75969 853 aa15.94■□□□□ 0.14
VPS29-209ENST00000551655 CPA1P15085 419 aa15.94■□□□□ 0.14
VPS29-209ENST00000551655 ARL2P36404 184 aa15.94■□□□□ 0.14
VPS29-209ENST00000551655 C1orf228Q6PIY5 440 aa15.94■□□□□ 0.14
VPS29-209ENST00000551655 PROSER1Q86XN7 944 aa15.94■□□□□ 0.14
VPS29-209ENST00000551655 CCDC148Q8NFR7 591 aa15.94■□□□□ 0.14
VPS29-209ENST00000551655 ZNF512Q96ME7 567 aaPredicted RBP15.94■□□□□ 0.14
VPS29-209ENST00000551655 ASAH2Q9NR71 780 aa15.94■□□□□ 0.14
VPS29-209ENST00000551655 CACNA1EQ15878 2313 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 A0A087WWV3 80 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 CCDC163A0A0D9SF12 145 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 DKC1O60832 514 aaKnown RBP eCLIP15.93■□□□□ 0.14
VPS29-209ENST00000551655 CAPNS1P04632 268 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 EDN1P05305 212 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 EPHA5P54756 1037 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 NLRP5P59047 1200 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 FGD1P98174 961 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 ELF2Q15723 593 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 NCAPH2Q6IBW4 605 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 IQCEQ6IPM2 695 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 FSTL4Q6MZW2 842 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 DHX32Q7L7V1 743 aaKnown RBP15.93■□□□□ 0.14
VPS29-209ENST00000551655 ARID3BQ8IVW6 561 aaPredicted RBP15.93■□□□□ 0.14
VPS29-209ENST00000551655 ABCA7Q8IZY2 2146 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 ELMOD1Q8N336 334 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 SYNPOQ8N3V7 929 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 SLC26A6Q9BXS9 759 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 POLR3FQ9H1D9 316 aaPredicted RBP15.93■□□□□ 0.14
VPS29-209ENST00000551655 FBXL5Q9UKA1 691 aa15.93■□□□□ 0.14
VPS29-209ENST00000551655 NUP210Q8TEM1 1887 aaPredicted RBP15.93■□□□□ 0.14
VPS29-209ENST00000551655 LRRIQ4A6NIV6 560 aa15.92■□□□□ 0.14
VPS29-209ENST00000551655 POU5F1BQ06416 359 aa15.92■□□□□ 0.14
VPS29-209ENST00000551655 SOX4Q06945 474 aaPredicted RBP15.92■□□□□ 0.14
VPS29-209ENST00000551655 UPP1Q16831 310 aa15.92■□□□□ 0.14
VPS29-209ENST00000551655 INF2Q27J81 1249 aa15.92■□□□□ 0.14
VPS29-209ENST00000551655 EEF1DP3Q658K8 133 aa15.92■□□□□ 0.14
VPS29-209ENST00000551655 MAEAQ7L5Y9 396 aa15.92■□□□□ 0.14
VPS29-209ENST00000551655 OTUD6AQ7L8S5 288 aa15.92■□□□□ 0.14
VPS29-209ENST00000551655 PPP1R10Q96QC0 940 aaKnown RBP15.92■□□□□ 0.14
VPS29-209ENST00000551655 MKNK1Q9BUB5 465 aa15.92■□□□□ 0.14
VPS29-209ENST00000551655 GPRC5CQ9NQ84 441 aa15.92■□□□□ 0.14
VPS29-209ENST00000551655 ANO2Q9NQ90 1003 aa15.92■□□□□ 0.14
VPS29-209ENST00000551655 THADAQ6YHU6 1953 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 KHNYNO15037 678 aaKnown RBP15.91■□□□□ 0.14
VPS29-209ENST00000551655 RNF40O75150 1001 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 LIG1P18858 919 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 GBP1P32455 592 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 IRX4P78413 519 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 EPHA7Q15375 998 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 TMC8Q8IU68 726 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 RASEFQ8IZ41 740 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 E2F7Q96AV8 911 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 CHFRQ96EP1 664 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 TMEM209Q96SK2 561 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 LRRC3Q9BY71 257 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 NFKBIZQ9BYH8 718 aa15.91■□□□□ 0.14
VPS29-209ENST00000551655 M0R2N6 131 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 MEFVO15553 781 aaPredicted RBP15.9■□□□□ 0.14
VPS29-209ENST00000551655 RHOBTB1O94844 696 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 SEC24BO95487 1268 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 PRAMEF12O95522 483 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 EGFP01133 1207 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 U2AF2P26368 475 aaKnown RBP eCLIP15.9■□□□□ 0.142e-6■■□□□ 11.9
VPS29-209ENST00000551655 RCAN1P53805 252 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 AKAP17AQ02040 695 aaKnown RBP15.9■□□□□ 0.14
VPS29-209ENST00000551655 NTRK3Q16288 839 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 TMEM132AQ24JP5 1023 aa15.9■□□□□ 0.14
VPS29-209ENST00000551655 NAIF1Q69YI7 327 aaPredicted RBP15.9■□□□□ 0.14
VPS29-209ENST00000551655 RNF19BQ6ZMZ0 732 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms