RNA–Protein interactions for RNA: ENST00000551246.1

LSM3P2-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2, humanhuman

BASIC

Gene LSM3P2, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P2-201ENST00000551246 KSR2Q6VAB6 950 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 LRRC74BQ6ZQY2 392 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 ACAD11Q709F0 780 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 SPATA24Q86W54 205 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 DDX42Q86XP3 938 aaKnown RBP eCLIP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 SMYD4Q8IYR2 804 aaPredicted RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 NME8Q8N427 588 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 SLC17A8Q8NDX2 589 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 PPP1R14CQ8TAE6 165 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 PLEKHO2Q8TD55 490 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 PRICKLE1Q96MT3 831 aaPredicted RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 CRAMP1Q96RY5 1269 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 ZNF184Q99676 751 aaPredicted RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 MIPEPQ99797 713 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 UBAC1Q9BSL1 405 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 HGH1Q9BTY7 390 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 DDX23Q9BUQ8 820 aaKnown RBP5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 MYLK2Q9H1R3 596 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 C12orf49Q9H741 205 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 USP29Q9HBJ7 922 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 RHBDL2Q9NX52 303 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 VPS54Q9P1Q0 977 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 CHMP2BQ9UQN3 213 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 CHKBQ9Y259 395 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 TELO2Q9Y4R8 837 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 PPME1Q9Y570 386 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 PCDHB6Q9Y5E3 794 aa5.65□□□□□ -1.5
LSM3P2-201ENST00000551246 LRP6O75581 1613 aa5.65□□□□□ -1.51
LSM3P2-201ENST00000551246 COL22A1Q8NFW1 1626 aaPredicted RBP5.65□□□□□ -1.51
LSM3P2-201ENST00000551246 KIDINS220Q9ULH0 1771 aa5.65□□□□□ -1.51
LSM3P2-201ENST00000551246 LMTK3Q96Q04 1460 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 RIMBP3CA6NJZ7 1639 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 RIMBP3BA6NNM3 1639 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 RIMBP3Q9UFD9 1639 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 SH3PXD2BA1X283 911 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 BTBD18B2RXH4 712 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 TCP11X1B4DZS4 312 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 LINC01387J3KSC0 135 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 GRM8O00222 908 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 DDX3XO00571 662 aaKnown RBP eCLIP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 GIPC1O14908 333 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 TTI1O43156 1089 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 DAPK3O43293 454 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 CBFA2T3O75081 653 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 TBX10O75333 385 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 PALMO75781 387 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 PSMG1O95456 288 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 ESRRAP11474 423 aaPredicted RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 RARGP13631 454 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 MUTP22033 750 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 MARK3P27448 753 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 CASP1P29466 404 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 LIFRP42702 1097 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 KLK7P49862 253 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 NEK2P51955 445 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 PMS1P54277 932 aaKnown RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 XIAPP98170 497 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 DCTN2Q13561 401 aaKnown RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 CYLC2Q14093 348 aaPredicted RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 MPP2Q14168 576 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 KRT72Q14CN4 511 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 PPP2R5EQ16537 467 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 MUM1Q2TAK8 710 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 CCDC153Q494R4 210 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 CERKLQ49MI3 558 aaPredicted RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 SMUG1Q53HV7 270 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 ODF2Q5BJF6 829 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 ACSBG2Q5FVE4 666 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 FKBP15Q5T1M5 1219 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 TRAPPC3LQ5T215 181 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 DEPDC1Q5TB30 811 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 RASIP1Q5U651 963 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 THOC7Q6I9Y2 204 aaKnown RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 SLC2A7Q6PXP3 512 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 PACS1Q6VY07 963 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 B3GNT6Q6ZMB0 384 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 CHST3Q7LGC8 479 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 TMC4Q7Z404 712 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 CROCCP3Q8IVE0 287 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 SRBD1Q8N5C6 995 aaKnown RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 SCAIQ8N9R8 606 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 GALNT11Q8NCW6 608 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 GIMAP8Q8ND71 665 aaPredicted RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 RIN3Q8TB24 985 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 ZNF398Q8TD17 642 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 NEK9Q8TD19 979 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 IGDCC4Q8TDY8 1250 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 WASF1Q92558 559 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 ANKS1AQ92625 1134 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 HAUS1Q96CS2 278 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 SHISA4Q96DD7 197 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 PTCD3Q96EY7 689 aaKnown RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 EPSTI1Q96J88 318 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 MAGEB18Q96M61 343 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 FAM161BQ96MY7 647 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 FRMD6Q96NE9 622 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 CCT7Q99832 543 aa5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 EIF2AQ9BY44 585 aaKnown RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 CADM1Q9BY67 442 aaKnown RBP5.64□□□□□ -1.51
LSM3P2-201ENST00000551246 STMN4Q9H169 189 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms