RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 SNX33Q8WV41 574 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 TRIM63Q969Q1 353 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 CYFIP2Q96F07 1278 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 APIPQ96GX9 242 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 NAP1L4Q99733 375 aaKnown RBP6.41□□□□□ -1.38
CPSF6-206ENST00000550987 UBA5Q9GZZ9 404 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 VPS11Q9H270 941 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 C14orf93Q9H972 538 aaKnown RBP6.41□□□□□ -1.38
CPSF6-206ENST00000550987 ZMAT3Q9HA38 289 aaKnown RBP6.41□□□□□ -1.38
CPSF6-206ENST00000550987 TRMT13Q9NUP7 481 aaKnown RBP6.41□□□□□ -1.38
CPSF6-206ENST00000550987 NPHP3Q7Z494 1330 aa6.41□□□□□ -1.38
CPSF6-206ENST00000550987 ARHGEF5Q12774 1597 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 NBNO60934 754 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 WDHD1O75717 1129 aaPredicted RBP6.4□□□□□ -1.38
CPSF6-206ENST00000550987 KITP10721 976 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 ATF2P15336 505 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 TNFSF4P23510 183 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 SLC7A1P30825 629 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 STAT5BP51692 787 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 SESN2P58004 480 aaPredicted RBP6.4□□□□□ -1.38
CPSF6-206ENST00000550987 PLS1Q14651 629 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 RAB39AQ14964 217 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 ZNF827Q17R98 1081 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 C19orf54Q5BKX5 351 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 ZSWIM9Q86XI8 627 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 COL23A1Q86Y22 540 aaPredicted RBP6.4□□□□□ -1.38
CPSF6-206ENST00000550987 ABI1Q8IZP0 508 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 CPXCR1Q8N123 301 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 KYQ8NBH2 561 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 PPP1R14CQ8TAE6 165 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 GFM2Q969S9 779 aaKnown RBP6.4□□□□□ -1.38
CPSF6-206ENST00000550987 EVI5LQ96CN4 794 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 GORASP1Q9BQQ3 440 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 C11orf84Q9BUA3 381 aaPredicted RBP6.4□□□□□ -1.38
CPSF6-206ENST00000550987 SENP6Q9GZR1 1112 aaPredicted RBP6.4□□□□□ -1.38
CPSF6-206ENST00000550987 HAPLN2Q9GZV7 340 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 CERS4Q9HA82 394 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 RSAD1Q9HA92 442 aa6.4□□□□□ -1.38
CPSF6-206ENST00000550987 MORC2Q9Y6X9 1032 aaPredicted RBP6.4□□□□□ -1.38
CPSF6-206ENST00000550987 NRXN1Q9ULB1 1477 aa6.4□□□□□ -1.39
CPSF6-206ENST00000550987 HMGB1P1B2RPK0 211 aaPredicted RBP6.39□□□□□ -1.39
CPSF6-206ENST00000550987 FOXN3O00409 490 aaPredicted RBP6.39□□□□□ -1.39
CPSF6-206ENST00000550987 N4BP3O15049 544 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 TBX3O15119 743 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 TMEM127O75204 238 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 CHGBP05060 677 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 GAAP10253 952 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 STT3AP46977 705 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 MEOX1P50221 254 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 NKX6-1P78426 367 aaPredicted RBP6.39□□□□□ -1.39
CPSF6-206ENST00000550987 FOXO4P98177 505 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 ADAM9Q13443 819 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 KRT72Q14CN4 511 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 KHDC1LQ5JSQ8 128 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 FAM209BQ5JX69 171 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 CIAPIN1Q6FI81 312 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 TAS1R1Q7RTX1 841 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 UNC5BQ8IZJ1 945 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 CCDC33Q8N5R6 958 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 OR2C3Q8N628 320 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 ZNF480Q8WV37 535 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 CCT6BQ92526 530 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 ZBTB8AQ96BR9 441 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 PTPN18Q99952 460 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 C22orf23Q9BZE7 217 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 BTBD1Q9H0C5 482 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 LDAHQ9H6V9 325 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 PNPLA8Q9NP80 782 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 TLR9Q9NR96 1032 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 TMEM140Q9NV12 185 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 SPATA6Q9NWH7 488 aaPredicted RBP6.39□□□□□ -1.39
CPSF6-206ENST00000550987 CALCOCO1Q9P1Z2 691 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 FEZ2Q9UHY8 353 aaPredicted RBP6.39□□□□□ -1.39
CPSF6-206ENST00000550987 FAM184BQ9ULE4 1060 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 CEP83Q9Y592 693 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 PCDHA1Q9Y5I3 950 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 MYBBP1AQ9BQG0 1328 aaKnown RBP6.39□□□□□ -1.39
CPSF6-206ENST00000550987 PIK3R4Q99570 1358 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 OVOS2A0A0G2JMS6 1433 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 OVOS2A0A0J9YW53 1432 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 TECPR2O15040 1411 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 OVOS2Q6IE36 1432 aa6.39□□□□□ -1.39
CPSF6-206ENST00000550987 KMT2BQ9UMN6 2715 aaPredicted RBP6.39□□□□□ -1.39
CPSF6-206ENST00000550987 hCG_1642624A0A1W2PR95 340 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 HMGCRP04035 888 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 TYRP14679 529 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 BRAFP15056 766 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 MALP21145 153 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 FBLN1P23142 703 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 PTPN7P35236 360 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 MAPK10P53779 464 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 SMAD4Q13485 552 aaKnown RBP6.38□□□□□ -1.39
CPSF6-206ENST00000550987 RALBP1Q15311 655 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 IZUMO3Q5VZ72 239 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 TMEM200BQ69YZ2 307 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 Q6ZVL8 140 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 KRT28Q7Z3Y7 464 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 GCDHQ92947 438 aaPredicted RBP6.38□□□□□ -1.39
CPSF6-206ENST00000550987 PDCD2LQ9BRP1 358 aa6.38□□□□□ -1.39
CPSF6-206ENST00000550987 CRB3Q9BUF7 120 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms