RNA–Protein interactions for RNA: ENST00000550519.5

SMARCC2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 3

Gene SMARCC2, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-210ENST00000550519 FBXO4Q9UKT5 387 aa23.69■■□□□ 1.38
SMARCC2-210ENST00000550519 MAFFQ9ULX9 164 aa23.69■■□□□ 1.38
SMARCC2-210ENST00000550519 ZNF197O14709 1029 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 FCARP24071 287 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 MCM4P33991 863 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 CCR2P41597 374 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 MAGEA9P43362 315 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 SLC12A3P55017 1021 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 ZBTB41Q5SVQ8 909 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 ZNF280DQ6N043 979 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 TPRG1Q6ZUI0 275 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 APPL2Q8NEU8 664 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 DDX12PQ92771 950 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 CLDN23Q96B33 292 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 NELL2Q99435 816 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 SPATA6Q9NWH7 488 aaPredicted RBP23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 TUBGCP4Q9UGJ1 667 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 AFF4Q9UHB7 1163 aaKnown RBP23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 KIF3AQ9Y496 699 aa23.68■■□□□ 1.38
SMARCC2-210ENST00000550519 GPR179Q6PRD1 2367 aa23.67■■□□□ 1.38
SMARCC2-210ENST00000550519 SHISA7A6NL88 538 aa23.67■■□□□ 1.38
SMARCC2-210ENST00000550519 CLDN3O15551 220 aa23.67■■□□□ 1.38
SMARCC2-210ENST00000550519 LAMTOR5O43504 91 aa23.67■■□□□ 1.38
SMARCC2-210ENST00000550519 MCTP1Q6DN14 999 aa23.67■■□□□ 1.38
SMARCC2-210ENST00000550519 KCNN1Q92952 543 aa23.67■■□□□ 1.38
SMARCC2-210ENST00000550519 HAPLN2Q9GZV7 340 aa23.67■■□□□ 1.38
SMARCC2-210ENST00000550519 PLEKHA5Q9HAU0 1116 aa23.67■■□□□ 1.38
SMARCC2-210ENST00000550519 PCDHB8Q9UN66 801 aa23.67■■□□□ 1.38
SMARCC2-210ENST00000550519 CACNA1AO00555 2505 aa23.67■■□□□ 1.38
SMARCC2-210ENST00000550519 FRYLO94915 3013 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 FANCMQ8IYD8 2048 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 NRG2O14511 850 aaPredicted RBP23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 PLA2G4BP0C869 781 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 CXCL8P10145 99 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 TARSP26639 723 aaKnown RBP23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 ADCY1Q08828 1119 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 ZBTB6Q15916 424 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 C8orf34Q49A92 452 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 FAM78AQ5JUQ0 283 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 ZNF852Q6ZMS4 543 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 PDZD4Q76G19 769 aaPredicted RBP23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 SUMF1Q8NBK3 374 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 DNASE1L2Q92874 299 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 BORCS6Q96GS4 357 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 PLIN2Q99541 437 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 ZFP14Q9HCL3 533 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 HEBP1Q9NRV9 189 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 CEP72Q9P209 647 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 CITO14578 2027 aa23.66■■□□□ 1.38
SMARCC2-210ENST00000550519 TTC26A0AVF1 554 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 VWA3AA6NCI4 1184 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 M0QZQ0 153 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 CLTAP09496 248 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 LRPAP1P30533 357 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 RPS9P46781 194 aaKnown RBP23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 FZD5Q13467 585 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 TMEM119Q4V9L6 283 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 ARSHQ5FYA8 562 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 CYP4A22Q5TCH4 519 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 ARL6IP4Q66PJ3 421 aaKnown RBP23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 IQCEQ6IPM2 695 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 HS6ST3Q8IZP7 471 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 TMEM130Q8N3G9 435 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 BEST2Q8NFU1 509 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 RUBCNQ92622 972 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 ASB16Q96NS5 453 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 LARSQ9P2J5 1176 aaKnown RBP23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 MIA3Q5JRA6 1907 aa23.65■■□□□ 1.38
SMARCC2-210ENST00000550519 DMXL1Q9Y485 3027 aa23.64■■□□□ 1.38
SMARCC2-210ENST00000550519 NPHP3-ACAD11A0A0J9YXS1 232 aa23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 H0YCG3 227 aa23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 NCAM2O15394 837 aa23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 KINO60870 393 aaKnown RBP23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 MOSPD3O75425 235 aa23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 OAZ2O95190 189 aa23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 MARCKSP29966 332 aaPredicted RBP23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 EPHA5P54756 1037 aa23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 NCKAP1LP55160 1127 aa23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 TWF1Q12792 350 aa23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 RNF19BQ6ZMZ0 732 aa23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 KIAA2013Q8IYS2 634 aa23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 ELMOD1Q8N336 334 aa23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 ZNF512Q96ME7 567 aaPredicted RBP23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 MRPS17Q9Y2R5 130 aaKnown RBP23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 GTF3C5Q9Y5Q8 519 aaPredicted RBP23.64■■□□□ 1.37
SMARCC2-210ENST00000550519 CPB1P15086 417 aa23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 CYP3A5P20815 502 aa23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 AARSP49588 968 aaKnown RBP eCLIP23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 CACNB1Q02641 598 aaPredicted RBP23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 CSTF1Q05048 431 aaKnown RBP23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 SPAG1Q07617 926 aa23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 RABEP1Q15276 862 aa23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 HAUS6Q7Z4H7 955 aa23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 LEMD2Q8NC56 503 aa23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 NELL1Q92832 810 aa23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 RMDN1Q96DB5 314 aa23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 CDK5RAP3Q96JB5 506 aa23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 ZSWIM3Q96MP5 696 aa23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 TRMT61BQ9BVS5 477 aaKnown RBP23.63■■□□□ 1.37
SMARCC2-210ENST00000550519 BRD9Q9H8M2 597 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms