RNA–Protein interactions for RNA: ENST00000550411.5

CBX5-204, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-204ENST00000550411 MYBP10242 640 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 MAPTP10636 758 aaKnown RBP7.54□□□□□ -1.2
CBX5-204ENST00000550411 SRFP11831 508 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 IGFBP6P24592 240 aaPredicted RBP7.54□□□□□ -1.2
CBX5-204ENST00000550411 ZNF131P52739 623 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 EFNA5P52803 228 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 DSG1Q02413 1049 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 NCBP1Q09161 790 aaKnown RBP7.54□□□□□ -1.2
CBX5-204ENST00000550411 PRPF4BQ13523 1007 aaKnown RBP7.54□□□□□ -1.2
CBX5-204ENST00000550411 PPP2R5AQ15172 486 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 MAPK6Q16659 721 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 FUT10Q6P4F1 479 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 SPATA31D4Q6ZUB0 917 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 SND1Q7KZF4 910 aaKnown RBP eCLIP7.54□□□□□ -1.29e-9■■■□□ 17.9
CBX5-204ENST00000550411 ERMP1Q7Z2K6 904 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 GPBP1Q86WP2 473 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 PALB2Q86YC2 1186 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 GLYCTKQ8IVS8 523 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 SLC44A3Q8N4M1 653 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 TMEM161BQ8NDZ6 487 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 DEPTORQ8TB45 409 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 RAD54LQ92698 747 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 KCNN1Q92952 543 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 NXPE3Q969Y0 559 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 DRC1Q96MC2 740 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 MYADMQ96S97 322 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 ACO2Q99798 780 aaKnown RBP7.54□□□□□ -1.2
CBX5-204ENST00000550411 PAAF1Q9BRP4 392 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 COLEC11Q9BWP8 271 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 TRIM6Q9C030 488 aaPredicted RBP7.54□□□□□ -1.2
CBX5-204ENST00000550411 CCSER1Q9C0I3 900 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 HAPLN2Q9GZV7 340 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 SEMA4AQ9H3S1 761 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 PLEKHA4Q9H4M7 779 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.54□□□□□ -1.2
CBX5-204ENST00000550411 SNTG2Q9NY99 539 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 EPS15L1Q9UBC2 864 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 CA14Q9ULX7 337 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 GIT1Q9Y2X7 761 aa7.54□□□□□ -1.2
CBX5-204ENST00000550411 SRPRBQ9Y5M8 271 aaKnown RBP7.54□□□□□ -1.2
CBX5-204ENST00000550411 TNRC6BQ9UPQ9 1833 aaKnown RBP7.54□□□□□ -1.2
CBX5-204ENST00000550411 DNAH14Q0VDD8 3507 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 PLXND1Q9Y4D7 1925 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 SNPHO15079 494 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 TGM5O43548 720 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 FAM189A1O60320 539 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 PAPLNO95428 1278 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 C1RP00736 705 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 LAMP2P13473 410 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 PLS3P13797 630 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 HOXB1P14653 301 aaPredicted RBP7.53□□□□□ -1.2
CBX5-204ENST00000550411 LIG1P18858 919 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 UBA7P41226 1012 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 NCKAP1LP55160 1127 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 CEBPZQ03701 1054 aaKnown RBP7.53□□□□□ -1.2
CBX5-204ENST00000550411 GRIK3Q13003 919 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 DMP1Q13316 513 aaPredicted RBP7.53□□□□□ -1.2
CBX5-204ENST00000550411 SLC39A14Q15043 492 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 USP41Q3LFD5 358 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 DCAF4L1Q3SXM0 396 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 ATF7IP2Q5U623 682 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 SLC39A4Q6P5W5 647 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 HSCBQ8IWL3 235 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 GPR65Q8IYL9 337 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 HACE1Q8IYU2 909 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 ABCA7Q8IZY2 2146 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 TMEM130Q8N3G9 435 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 KCNG4Q8TDN1 519 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 GPR152Q8TDT2 470 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 RABGGTAQ92696 567 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 ZNF707Q96C28 371 aaPredicted RBP7.53□□□□□ -1.2
CBX5-204ENST00000550411 CDK5RAP3Q96JB5 506 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 CHAMP1Q96JM3 812 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 ZBTB45Q96K62 511 aaPredicted RBP7.53□□□□□ -1.2
CBX5-204ENST00000550411 B3GALT6Q96L58 329 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 IFT74Q96LB3 600 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 NTPCRQ9BSD7 190 aaKnown RBP7.53□□□□□ -1.2
CBX5-204ENST00000550411 TIPINQ9BVW5 301 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 TARS2Q9BW92 718 aaKnown RBP7.53□□□□□ -1.2
CBX5-204ENST00000550411 GPR62Q9BZJ7 368 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 PRKD2Q9BZL6 878 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 NT5C3AQ9H0P0 336 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 IKZF4Q9H2S9 585 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 TBC1D17Q9HA65 648 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 CHST7Q9NS84 486 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 ZDHHC7Q9NXF8 308 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 FNIP2Q9P278 1114 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 ADAM28Q9UKQ2 775 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 TNFSF13BQ9Y275 285 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 ZDHHC9Q9Y397 364 aa7.53□□□□□ -1.2
CBX5-204ENST00000550411 CCDC169A6NNP5 214 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 ATP9BO43861 1147 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 KIF4AO95239 1232 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 F13A1P00488 732 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 LMNAP02545 664 aaKnown RBP7.52□□□□□ -1.21
CBX5-204ENST00000550411 ZSCAN22P10073 491 aaPredicted RBP7.52□□□□□ -1.21
CBX5-204ENST00000550411 RPL17P18621 184 aaKnown RBP7.52□□□□□ -1.21
CBX5-204ENST00000550411 CREMQ03060 361 aa7.52□□□□□ -1.21
CBX5-204ENST00000550411 SOX4Q06945 474 aaPredicted RBP7.52□□□□□ -1.21
CBX5-204ENST00000550411 DHX8Q14562 1220 aaKnown RBP7.52□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms