RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 LILRA6Q6PI73 481 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 SPATA31D4Q6ZUB0 917 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 GRAMD1CQ8IYS0 662 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 KREMEN2Q8NCW0 462 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 SAAL1Q96ER3 474 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 FAM213AQ9BRX8 229 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 TSHZ2Q9NRE2 1034 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 ZDHHC7Q9NXF8 308 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 FBXW11Q9UKB1 542 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 HPSEQ9Y251 543 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 BACE2Q9Y5Z0 518 aa18.7■□□□□ 0.58
CHMP1A-208ENST00000550102 PVALEFA0A1B0GWK0 134 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 A0A1W2PQ27 194 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 A0A1W2PQ64 194 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 A0A1W2PQD8 194 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 DCXO43602 365 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 ALADP13716 330 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 OR1D2P34982 312 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 SYKP43405 635 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 GUCY2FP51841 1108 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 EHHADHQ08426 723 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 CUL4BQ13620 913 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 VARS2Q5ST30 1063 aaKnown RBP18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 CRELD2Q6UXH1 353 aaPredicted RBP18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 CYP26C1Q6V0L0 522 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 EPM2AIP1Q7L775 607 aaPredicted RBP18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 RNF135Q8IUD6 432 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 BRSK2Q8IWQ3 736 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 CBWD1Q9BRT8 395 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 RHOBTB2Q9BYZ6 727 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 PCDHB8Q9UN66 801 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 CDY1Q9Y6F8 540 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 DOCK8Q8NF50 2099 aa18.69■□□□□ 0.58
CHMP1A-208ENST00000550102 FAM237AA0A1B0GTK4 181 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 PI4K2BG5E9Z4 385 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 H7C4K7 107 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 KIAA0391O15091 583 aaKnown RBP18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 ADAM12O43184 909 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 RFPL2O75678 378 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 LDHAP00338 332 aaKnown RBP18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 SP100P23497 879 aaPredicted RBP18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 RAB33AQ14088 237 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 CCDC149Q6ZUS6 474 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 TMEM130Q8N3G9 435 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 FSIP1Q8NA03 581 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 TDRD5Q8NAT2 981 aaKnown RBP18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 APPL2Q8NEU8 664 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 SMG7Q92540 1137 aaKnown RBP18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 PAGE5Q96GU1 130 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 GDPD2Q9HCC8 539 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 EXOC1Q9NV70 894 aa18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 RBAKQ9NYW8 714 aaPredicted RBP18.68■□□□□ 0.58
CHMP1A-208ENST00000550102 DOCK6Q96HP0 2047 aa18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 CCDC195A0A1B0GUA6 201 aa18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 EXTL3O43909 919 aa18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 ZMYND10O75800 440 aa18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 PAPLNO95428 1278 aa18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 MYL1P05976 194 aa18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 AARSP49588 968 aaKnown RBP eCLIP18.67■□□□□ 0.587e-7■■■■■ 54
CHMP1A-208ENST00000550102 NDUFA8P51970 172 aa18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 ZNF280DQ6N043 979 aa18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 NT5DC4Q86YG4 428 aa18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 FEZF2Q8TBJ5 459 aa18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 NOC3LQ8WTT2 800 aaKnown RBP18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 EPHX3Q9H6B9 360 aa18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 MUTYHQ9UIF7 546 aa18.67■□□□□ 0.58
CHMP1A-208ENST00000550102 GOLGA8IPA6NC78 632 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 GOLGA8JA6NMD2 632 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 M0QZQ0 153 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 C8AP07357 584 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 PAX3P23760 479 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 HOXD13P35453 343 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 ROR1Q01973 937 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 CTXN3Q4LDR2 81 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 C9orf57Q5W0N0 161 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 SLC8B1Q6J4K2 584 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 RSPO2Q6UXX9 243 aaPredicted RBP18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 EFCAB13Q8IY85 973 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 GPD1LQ8N335 351 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 ZNF507Q8TCN5 953 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 ZNF707Q96C28 371 aaPredicted RBP18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 PCIF1Q9H4Z3 704 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 PIDD1Q9HB75 910 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 USTQ9Y2C2 406 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 CLUHO75153 1309 aa18.66■□□□□ 0.58
CHMP1A-208ENST00000550102 MYO10Q9HD67 2058 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 ANO9A1A5B4 782 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 ARHGEF37A1IGU5 675 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 C2CD4DB7Z1M9 353 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 PPEF2O14830 753 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 HNRNPA1P09651 372 aaKnown RBP eCLIP18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 ODC1P11926 461 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 HOXA9P31269 272 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 YWHAHQ04917 246 aaPredicted RBP18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 MRPL58Q14197 206 aaKnown RBP18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 BMT2Q1RMZ1 405 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 PPM1LQ5SGD2 360 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 DSTYKQ6XUX3 929 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 HS2ST1Q7LGA3 356 aa18.65■□□□□ 0.58
CHMP1A-208ENST00000550102 NELFCDQ8IXH7 590 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms