RNA–Protein interactions for RNA: ENST00000549883.5

HDAC7-229, Transcript of histone deacetylase 7, humanhuman

TSL 3

Gene HDAC7, Length 537 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-229ENST00000549883 CCL16O15467 120 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 DCXO43602 365 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 KLRC4O43908 158 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 TBC1D4O60343 1298 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 ZMYND10O75800 440 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 PRR29P0C7W0 189 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 SCP2P22307 547 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 CMA1P23946 247 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 LRPAP1P30533 357 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 MTHFRP42898 656 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 AARSP49588 968 aaKnown RBP eCLIP10.62□□□□□ -0.71
HDAC7-229ENST00000549883 NDUFA8P51970 172 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 ARPP19P56211 112 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 ROR1Q01973 937 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 RAB33AQ14088 237 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 MRPL58Q14197 206 aaKnown RBP10.62□□□□□ -0.71
HDAC7-229ENST00000549883 TMEM132DQ14C87 1099 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 FAM26FQ5R3K3 315 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 SLFN12LQ6IEE8 588 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 NELFCDQ8IXH7 590 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 SYCP3Q8IZU3 236 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 CMASQ8NFW8 434 aaPredicted RBP10.62□□□□□ -0.71
HDAC7-229ENST00000549883 NOC3LQ8WTT2 800 aaKnown RBP10.62□□□□□ -0.71
HDAC7-229ENST00000549883 SMG7Q92540 1137 aaKnown RBP10.62□□□□□ -0.71
HDAC7-229ENST00000549883 RIPOR3Q96MK2 946 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 SLC39A2Q9NP94 309 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 LIMD1Q9UGP4 676 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 FBXL5Q9UKA1 691 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 UBQLN1Q9UMX0 589 aaKnown RBP10.62□□□□□ -0.71
HDAC7-229ENST00000549883 PCDHB13Q9Y5F0 798 aa10.62□□□□□ -0.71
HDAC7-229ENST00000549883 TRIOO75962 3097 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 PTPRJQ12913 1337 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 ANO9A1A5B4 782 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 WDR27A2RRH5 827 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 M0QZQ0 153 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 PIRO00625 290 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 CLIC2O15247 247 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 TGFB1I1O43294 461 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 TRAPPC3O43617 180 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 PAPLNO95428 1278 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 SEC24AO95486 1093 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 VNN2O95498 520 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 OR4Q2P0C623 313 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 SLFN14P0C7P3 912 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 CYP3A5P20815 502 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 KYAT1Q16773 422 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 C9orf57Q5W0N0 161 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 LMBRD2Q68DH5 695 aaPredicted RBP10.61□□□□□ -0.71
HDAC7-229ENST00000549883 ANKS3Q6ZW76 656 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 UNC13DQ70J99 1090 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 CBWD2Q8IUF1 395 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 SLC7A14Q8TBB6 771 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 ZNF507Q8TCN5 953 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 SCFD1Q8WVM8 642 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 NECTIN4Q96NY8 510 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 MYADMQ96S97 322 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 TMEM209Q96SK2 561 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 PRKD2Q9BZL6 878 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 PLEKHA4Q9H4M7 779 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 PDE11AQ9HCR9 933 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 HCFC1R1Q9NWW0 138 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 DPP3Q9NY33 737 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 PCDHB8Q9UN66 801 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 EXOC7Q9UPT5 735 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 BACE2Q9Y5Z0 518 aa10.61□□□□□ -0.71
HDAC7-229ENST00000549883 FAM237AA0A1B0GTK4 181 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 NRG2O14511 850 aaPredicted RBP10.6□□□□□ -0.71
HDAC7-229ENST00000549883 SYN3O14994 580 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 C8AP07357 584 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 GARTP22102 1010 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 ABCD1P33897 745 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 LILRA4P59901 499 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 AMPD3Q01432 767 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 CREMQ03060 361 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 STK4Q13043 487 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 BECN1Q14457 450 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 POSTNQ15063 836 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 CTXN3Q4LDR2 81 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 TMEM31Q5JXX7 168 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 SLC8B1Q6J4K2 584 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 ARMCX5Q6P1M9 558 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 POTEHQ6S545 545 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 C15orf39Q6ZRI6 1047 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 CCDC149Q6ZUS6 474 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 GRASPQ7Z6J2 395 aaPredicted RBP10.6□□□□□ -0.71
HDAC7-229ENST00000549883 BRSK2Q8IWQ3 736 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 FSIP1Q8NA03 581 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 TDRD5Q8NAT2 981 aaKnown RBP10.6□□□□□ -0.71
HDAC7-229ENST00000549883 KIAA0895Q8NCT3 520 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 BEST2Q8NFU1 509 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 CXorf38Q8TB03 319 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 HDAC7Q8WUI4 952 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 RSAD2Q8WXG1 361 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 BORCS6Q96GS4 357 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 SENP8Q96LD8 212 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 LRRC27Q9C0I9 530 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 CRISPLD1Q9H336 500 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 ASB7Q9H672 318 aa10.6□□□□□ -0.71
HDAC7-229ENST00000549883 WDR6Q9NNW5 1121 aaKnown RBP10.6□□□□□ -0.71
HDAC7-229ENST00000549883 CLUHO75153 1309 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms