RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 PIGOQ8TEQ8 1089 aa11.9□□□□□ -0.5
TRAFD1-206ENST00000549358 ADPGKQ9BRR6 497 aa11.9□□□□□ -0.5
TRAFD1-206ENST00000549358 AGXT2Q9BYV1 514 aa11.9□□□□□ -0.5
TRAFD1-206ENST00000549358 SMOC1Q9H4F8 434 aa11.9□□□□□ -0.5
TRAFD1-206ENST00000549358 TRPV4Q9HBA0 871 aa11.9□□□□□ -0.5
TRAFD1-206ENST00000549358 GOLGA2P5Q9HBQ8 144 aa11.9□□□□□ -0.5
TRAFD1-206ENST00000549358 INSL5Q9Y5Q6 135 aa11.9□□□□□ -0.5
TRAFD1-206ENST00000549358 CACNA1GO43497 2377 aa11.9□□□□□ -0.51
TRAFD1-206ENST00000549358 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.51
TRAFD1-206ENST00000549358 COL4A2P08572 1712 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 CPLX1O14810 134 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 USO1O60763 962 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 RPP40O75818 363 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 LYPLA2O95372 231 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 PRKCBP05771 671 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 HOXA6P31267 233 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 RAP1GAPP47736 663 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 EVCP57679 992 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 TWF1Q12792 350 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 TEAD2Q15562 447 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 FAM187BQ17R55 369 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 EEF1DP3Q658K8 133 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 TXNDC11Q6PKC3 985 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 PIK3AP1Q6ZUJ8 805 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 KBTBD6Q86V97 674 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 SLFN12Q8IYM2 578 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 FAM200AQ8TCP9 573 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 GAB3Q8WWW8 586 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 RSPRY1Q96DX4 576 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 MSANTD3Q96H12 275 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 LOXL4Q96JB6 756 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 UROC1Q96N76 676 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 PPP1R10Q96QC0 940 aaKnown RBP11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 SLITRK6Q9H5Y7 841 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 C8orf33Q9H7E9 229 aaPredicted RBP11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 CEP72Q9P209 647 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 PCDHA12Q9UN75 941 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 SNX14Q9Y5W7 946 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 WDFY3Q8IZQ1 3526 aa11.89□□□□□ -0.51
TRAFD1-206ENST00000549358 SPECC1L-ADORA2AF8WAN1 911 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 CHADO15335 359 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 EXTL3O43909 919 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 EPN2O95208 641 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 CCDC192P0DO97 292 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 SPINK2P20155 84 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 FOXC1Q12948 553 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 GSE1Q14687 1217 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 PON2Q15165 354 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 MAPK6Q16659 721 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 RNF43Q68DV7 783 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 CDCA2Q69YH5 1023 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 KDF1Q8NAX2 398 aaPredicted RBP11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 KCNB2Q92953 911 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 E2F7Q96AV8 911 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 NAP1L4Q99733 375 aaKnown RBP11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 GPR88Q9GZN0 384 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 C2orf40Q9H1Z8 148 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 ASAH2Q9NR71 780 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 GTSE1Q9NYZ3 720 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 FBXL5Q9UKA1 691 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 TICRRQ7Z2Z1 1910 aa11.88□□□□□ -0.51
TRAFD1-206ENST00000549358 ZZEF1O43149 2961 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 SMIM28A0A1B0GU29 152 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 MYBPHLA2RUH7 354 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 H7C4K7 107 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 ACKR2O00590 384 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 GIPC1O14908 333 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 EDN1P05305 212 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 ATP2B1P20020 1258 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 CTHP32929 405 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 NOVA1P51513 510 aaKnown RBP11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 SOX4Q06945 474 aaPredicted RBP11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 FCHO2Q0JRZ9 810 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 CTXN3Q4LDR2 81 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 PLA2G2CQ5R387 149 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 TPGS2Q68CL5 300 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 TCEAL6Q6IPX3 200 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 RALGPS2Q86X27 583 aaPredicted RBP11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 FAM177A1Q8N128 213 aaPredicted RBP11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 LEMD2Q8NC56 503 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 OXER1Q8TDS5 423 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 TCEAL3Q969E4 200 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 ZFYVE19Q96K21 471 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 LARP6Q9BRS8 491 aaKnown RBP11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 ARID2Q68CP9 1835 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 VWA8A3KMH1 1905 aa11.87□□□□□ -0.51
TRAFD1-206ENST00000549358 A0A1W2PRU2 124 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 PODXLO00592 558 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 XRCC6P12956 609 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 HSPA4P34932 840 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 MPLP40238 635 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 TXKP42681 527 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 EPHA5P54756 1037 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 STK3Q13188 491 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 CCINQ13939 588 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 MRPL58Q14197 206 aaKnown RBP11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 DCAF4L1Q3SXM0 396 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 BMP2KLQ5H9B9 411 aa11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 EARS2Q5JPH6 523 aaKnown RBP11.86□□□□□ -0.51
TRAFD1-206ENST00000549358 RNF19BQ6ZMZ0 732 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms