RNA–Protein interactions for RNA: ENST00000548938.5

HDAC7-228, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 2,719 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-228ENST00000548938 ENTPD5O75356 428 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 MAGEA4P43358 317 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 C4orf33Q8N1A6 199 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 HELQQ8TDG4 1101 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 DENND1AQ8TEH3 1009 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 INPP5DQ92835 1189 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 CCDC127Q96BQ5 260 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 ZBTB10Q96DT7 871 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 DDX27Q96GQ7 796 aaKnown RBP14.57□□□□□ -0.08
HDAC7-228ENST00000548938 GMCL1Q96IK5 515 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 ZNF577Q9BSK1 485 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.57□□□□□ -0.08
HDAC7-228ENST00000548938 MROH7Q68CQ1 1323 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 CALRP27797 417 aaKnown RBP14.57□□□□□ -0.08
HDAC7-228ENST00000548938 CBWD2Q8IUF1 395 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 TEX9Q8N6V9 391 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 GMCL1P1Q8NEA9 526 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 C10orf82Q8WW14 230 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 MAIP1Q8WWC4 291 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 ACCSQ96QU6 501 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 SH2D3AQ9BRG2 576 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 MRIQ9BWK5 157 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 TMEM206Q9H813 350 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 PRR12Q9ULL5 1215 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 YDJCA8MPS7 323 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 EDF1O60869 148 aaKnown RBP14.57□□□□□ -0.08
HDAC7-228ENST00000548938 ATP6V1C1P21283 382 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 PTDSS1P48651 473 aaKnown RBP14.57□□□□□ -0.08
HDAC7-228ENST00000548938 KLF1Q13351 362 aaPredicted RBP14.57□□□□□ -0.08
HDAC7-228ENST00000548938 SPARCL1Q14515 664 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 PKN2Q16513 984 aaKnown RBP14.57□□□□□ -0.08
HDAC7-228ENST00000548938 CLEC16AQ2KHT3 1053 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 HP1BP3Q5SSJ5 553 aaPredicted RBP14.57□□□□□ -0.08
HDAC7-228ENST00000548938 SH3BP5LQ7L8J4 393 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 TTLL6Q8N841 843 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 ASAP3Q8TDY4 903 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 ADAM33Q9BZ11 813 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 TRABDQ9H4I3 376 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 DENND2DQ9H6A0 471 aaPredicted RBP14.57□□□□□ -0.08
HDAC7-228ENST00000548938 KIAA1586Q9HCI6 787 aa14.57□□□□□ -0.08
HDAC7-228ENST00000548938 TOPORSQ9NS56 1045 aaPredicted RBP14.57□□□□□ -0.08
HDAC7-228ENST00000548938 LARSQ9P2J5 1176 aaKnown RBP14.57□□□□□ -0.08
HDAC7-228ENST00000548938 E7ENQ6 273 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 POC1B-GALNT4F8VUJ3 575 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 MAP3K13O43283 966 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 DCTN3O75935 186 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 KCNA3P22001 575 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 RPA3P35244 121 aaPredicted RBP14.56□□□□□ -0.08
HDAC7-228ENST00000548938 INHBEP58166 350 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 JAG1P78504 1218 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 CEP55Q53EZ4 464 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 THEMIS2Q5TEJ8 643 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 CAPN12Q6ZSI9 719 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 C12orf56Q8IXR9 622 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 RIBC1Q8N443 379 aaPredicted RBP14.56□□□□□ -0.08
HDAC7-228ENST00000548938 ENDOVQ8N8Q3 282 aaKnown RBP14.56□□□□□ -0.08
HDAC7-228ENST00000548938 CCDC89Q8N998 374 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 SAYSD1Q9NPB0 183 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 PKD2L1Q9P0L9 805 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 SPDYE5A6NIY4 337 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 ABHD2P08910 425 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 MYBL1P10243 752 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 FGFR1P11362 822 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 DPEP1P16444 411 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 RBM5P52756 815 aaKnown RBP eCLIP14.56□□□□□ -0.08
HDAC7-228ENST00000548938 CENPCQ03188 943 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 FASTKD3Q14CZ7 662 aaKnown RBP14.56□□□□□ -0.08
HDAC7-228ENST00000548938 SLC1A5Q15758 541 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 PDK4Q16654 411 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 P3H1Q32P28 736 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 TMEM179Q6ZVK1 233 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 RELL1Q8IUW5 271 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 LRRC8CQ8TDW0 803 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 WDR11Q9BZH6 1224 aa14.56□□□□□ -0.08
HDAC7-228ENST00000548938 PRPF4O43172 522 aaKnown RBP eCLIP14.55□□□□□ -0.08
HDAC7-228ENST00000548938 FDX1P10109 184 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 KRT5P13647 590 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 KRT15P19012 456 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 MUTP22033 750 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 ALDH3A1P30838 453 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 GJC1P36383 396 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 TAF1BQ53T94 588 aaPredicted RBP14.55□□□□□ -0.08
HDAC7-228ENST00000548938 ANKS1BQ7Z6G8 1248 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 LMNTD2Q8IXW0 634 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP14.55□□□□□ -0.082e-8■■■■□ 23.4
HDAC7-228ENST00000548938 ZCCHC9Q8N567 271 aaKnown RBP14.55□□□□□ -0.08
HDAC7-228ENST00000548938 GLIS1Q8NBF1 620 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 TAS1R2Q8TE23 839 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 MRRFQ96E11 262 aaKnown RBP14.55□□□□□ -0.08
HDAC7-228ENST00000548938 USP20Q9Y2K6 914 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 CA4P22748 312 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 ABCB5Q2M3G0 1257 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 PCNX4Q63HM2 1172 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 RGS9BPQ6ZS82 235 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 GSTA5Q7RTV2 222 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 BBOF1Q8ND07 529 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 SLC16A10Q8TF71 515 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 CPA5Q8WXQ8 436 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 FAM84AQ96KN4 292 aa14.55□□□□□ -0.08
HDAC7-228ENST00000548938 TEKT3Q9BXF9 490 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms