RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 TIMM13Q9Y5L4 95 aaPredicted RBP17.12■□□□□ 0.33
DDX54-205ENST00000548786 FAM86C2PA6NEL3 165 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 XPOTO43592 962 aaKnown RBP17.11■□□□□ 0.33
DDX54-205ENST00000548786 MTHFRP42898 656 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 ATAT1Q5SQI0 421 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 SPATA1Q5VX52 437 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 PDXDC1Q6P996 788 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 ANKS3Q6ZW76 656 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 EPM2AIP1Q7L775 607 aaPredicted RBP17.11■□□□□ 0.33
DDX54-205ENST00000548786 GPR149Q86SP6 731 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 RNF135Q8IUD6 432 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 CD302Q8IX05 232 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 EFCAB13Q8IY85 973 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 SUSD3Q96L08 255 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 EXOC1Q9NV70 894 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 RBAKQ9NYW8 714 aaPredicted RBP17.11■□□□□ 0.33
DDX54-205ENST00000548786 C2orf16Q68DN1 1984 aa17.11■□□□□ 0.33
DDX54-205ENST00000548786 LOC730098B7Z3J9 87 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 CLIC2O15247 247 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 EIF3DO15371 548 aaKnown RBP eCLIP17.1■□□□□ 0.33
DDX54-205ENST00000548786 ADRB2P07550 413 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 CYP3A5P20815 502 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 GARTP22102 1010 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 LRPAP1P30533 357 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 TFAMQ00059 246 aaKnown RBP17.1■□□□□ 0.33
DDX54-205ENST00000548786 EHHADHQ08426 723 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 LIN9Q5TKA1 542 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 C9orf57Q5W0N0 161 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 LILRA6Q6PI73 481 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 ELMSAN1Q6PJG2 1045 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 DSTYKQ6XUX3 929 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 GPR65Q8IYL9 337 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 SCFD1Q8WVM8 642 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 SMG7Q92540 1137 aaKnown RBP17.1■□□□□ 0.33
DDX54-205ENST00000548786 NECTIN4Q96NY8 510 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 ASB7Q9H672 318 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 PIDD1Q9HB75 910 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 TRIOO75962 3097 aa17.1■□□□□ 0.33
DDX54-205ENST00000548786 PVALEFA0A1B0GWK0 134 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 A0A1W2PQ27 194 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 A0A1W2PQ64 194 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 A0A1W2PQD8 194 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 C2CD4DB7Z1M9 353 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 SYN3O14994 580 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 KLRC4O43908 158 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 EXTL3O43909 919 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 IL18RAPO95256 599 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 C8AP07357 584 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 CYP2J2P51589 502 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 KMT5BQ4FZB7 885 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 CTXN3Q4LDR2 81 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 LMBRD2Q68DH5 695 aaPredicted RBP17.09■□□□□ 0.33
DDX54-205ENST00000548786 CBWD2Q8IUF1 395 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 BRSK2Q8IWQ3 736 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 GPD1LQ8N335 351 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 RDH13Q8NBN7 331 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 SLC7A14Q8TBB6 771 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 ZNF507Q8TCN5 953 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 PLEKHA4Q9H4M7 779 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 PDE11AQ9HCR9 933 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 DPP3Q9NY33 737 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 HSPBP1Q9NZL4 362 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 DPP7Q9UHL4 492 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 FBXW11Q9UKB1 542 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 PCDHB8Q9UN66 801 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 POLIQ9UNA4 740 aa17.09■□□□□ 0.33
DDX54-205ENST00000548786 GOLGA6L4A6NEF3 574 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 SPTLC1O15269 473 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 CCL16O15467 120 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 TGFB1I1O43294 461 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 CDR1P51861 262 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 ROR1Q01973 937 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 RAB33AQ14088 237 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 PPM1LQ5SGD2 360 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 ZNF707Q96C28 371 aaPredicted RBP17.08■□□□□ 0.32
DDX54-205ENST00000548786 AGPAT3Q9NRZ7 376 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 USP25Q9UHP3 1055 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 FBXL5Q9UKA1 691 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 DERAQ9Y315 318 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 C2CD2Q9Y426 696 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 NR2E1Q9Y466 385 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 BACE2Q9Y5Z0 518 aa17.08■□□□□ 0.32
DDX54-205ENST00000548786 FAM237AA0A1B0GTK4 181 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 H7C4K7 107 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 DCXO43602 365 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 ZMYND10O75800 440 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 ZNF202O95125 648 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 LDHAP00338 332 aaKnown RBP17.07■□□□□ 0.32
DDX54-205ENST00000548786 RPN1P04843 607 aaKnown RBP17.07■□□□□ 0.32
DDX54-205ENST00000548786 LILRA4P59901 499 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 STK4Q13043 487 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 SCARA3Q6AZY7 606 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 ZNF280DQ6N043 979 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 KRBA2Q6ZNG9 492 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 CCDC149Q6ZUS6 474 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 TDRD5Q8NAT2 981 aaKnown RBP17.07■□□□□ 0.32
DDX54-205ENST00000548786 KIAA0895Q8NCT3 520 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 APPL2Q8NEU8 664 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 TSPAN18Q96SJ8 248 aa17.07■□□□□ 0.32
DDX54-205ENST00000548786 MTCL1Q9Y4B5 1905 aaKnown RBP17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms