RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 KCNE1P15382 129 aa18.02■□□□□ 0.48
SSH1-208ENST00000548522 MUTP22033 750 aa18.02■□□□□ 0.48
SSH1-208ENST00000548522 CDC25AP30304 524 aa18.02■□□□□ 0.48
SSH1-208ENST00000548522 VIPR2P41587 438 aa18.02■□□□□ 0.48
SSH1-208ENST00000548522 MRPL58Q14197 206 aaKnown RBP18.02■□□□□ 0.48
SSH1-208ENST00000548522 CTXN3Q4LDR2 81 aa18.02■□□□□ 0.48
SSH1-208ENST00000548522 PDZD4Q76G19 769 aaPredicted RBP18.02■□□□□ 0.48
SSH1-208ENST00000548522 APBB1IPQ7Z5R6 666 aaPredicted RBP18.02■□□□□ 0.48
SSH1-208ENST00000548522 PARD6AQ9NPB6 346 aa18.02■□□□□ 0.48
SSH1-208ENST00000548522 SLC38A7Q9NVC3 462 aa18.02■□□□□ 0.48
SSH1-208ENST00000548522 NUB1Q9Y5A7 615 aa18.02■□□□□ 0.48
SSH1-208ENST00000548522 TPRP12270 2363 aaKnown RBP18.02■□□□□ 0.47
SSH1-208ENST00000548522 SFI1A8K8P3 1242 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 VNN2O95498 520 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 MCF2P10911 925 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 TGM1P22735 817 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 GDI1P31150 447 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 TOB1P50616 345 aaPredicted RBP18.01■□□□□ 0.47
SSH1-208ENST00000548522 TWF1Q12792 350 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 DMP1Q13316 513 aaPredicted RBP18.01■□□□□ 0.47
SSH1-208ENST00000548522 IL17AQ16552 155 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 LPAL2Q16609 132 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 IGSF22Q8N9C0 903 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 FBXO18Q8NFZ0 1043 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 RSPRY1Q96DX4 576 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 SUSD3Q96L08 255 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 ACAP3Q96P50 834 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 NELL2Q99435 816 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 TRMT61BQ9BVS5 477 aaKnown RBP18.01■□□□□ 0.47
SSH1-208ENST00000548522 ZFP14Q9HCL3 533 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 KMT5AQ9NQR1 393 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 ANKFY1Q9P2R3 1169 aa18.01■□□□□ 0.47
SSH1-208ENST00000548522 SLC16A4O15374 487 aa18■□□□□ 0.47
SSH1-208ENST00000548522 SEC24BO95487 1268 aa18■□□□□ 0.47
SSH1-208ENST00000548522 MYL4P12829 197 aa18■□□□□ 0.47
SSH1-208ENST00000548522 MCM4P33991 863 aa18■□□□□ 0.47
SSH1-208ENST00000548522 ATXN1P54253 815 aaKnown RBP18■□□□□ 0.47
SSH1-208ENST00000548522 SPAG1Q07617 926 aa18■□□□□ 0.47
SSH1-208ENST00000548522 RAD51AP2Q09MP3 1159 aa18■□□□□ 0.47
SSH1-208ENST00000548522 ZNF280DQ6N043 979 aa18■□□□□ 0.47
SSH1-208ENST00000548522 MPZL3Q6UWV2 235 aa18■□□□□ 0.47
SSH1-208ENST00000548522 RNF19BQ6ZMZ0 732 aa18■□□□□ 0.47
SSH1-208ENST00000548522 MAP4K3Q8IVH8 894 aa18■□□□□ 0.47
SSH1-208ENST00000548522 SMARCD2Q92925 531 aa18■□□□□ 0.47
SSH1-208ENST00000548522 TBC1D32Q96NH3 1257 aa18■□□□□ 0.47
SSH1-208ENST00000548522 TCHPQ9BT92 498 aa18■□□□□ 0.47
SSH1-208ENST00000548522 CHRDQ9H2X0 955 aa18■□□□□ 0.47
SSH1-208ENST00000548522 CRISPLD1Q9H336 500 aa18■□□□□ 0.47
SSH1-208ENST00000548522 TMEM134Q9H6X4 195 aa18■□□□□ 0.47
SSH1-208ENST00000548522 ZNF334Q9HCZ1 680 aaPredicted RBP18■□□□□ 0.47
SSH1-208ENST00000548522 MRPS17Q9Y2R5 130 aaKnown RBP18■□□□□ 0.47
SSH1-208ENST00000548522 PCDHB6Q9Y5E3 794 aa18■□□□□ 0.47
SSH1-208ENST00000548522 PIAS3Q9Y6X2 628 aa18■□□□□ 0.47
SSH1-208ENST00000548522 ACACBO00763 2458 aa18■□□□□ 0.47
SSH1-208ENST00000548522 H7C4K7 107 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 NCAM2O15394 837 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 OR4Q2P0C623 313 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 PTGDRQ13258 359 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 GAS6Q14393 721 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 TEAD2Q15562 447 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 SLC10A6Q3KNW5 377 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 TPGS2Q68CL5 300 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 RINT1Q6NUQ1 792 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 SHKBP1Q8TBC3 707 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 ZSCAN18Q8TBC5 510 aaPredicted RBP17.99■□□□□ 0.47
SSH1-208ENST00000548522 DDX12PQ92771 950 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 CNTNAP3BQ96NU0 1288 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 MMTAG2Q9BU76 263 aaKnown RBP17.99■□□□□ 0.47
SSH1-208ENST00000548522 CNTNAP3Q9BZ76 1288 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 HAPLN2Q9GZV7 340 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 AFF4Q9UHB7 1163 aaKnown RBP17.99■□□□□ 0.47
SSH1-208ENST00000548522 USP18Q9UMW8 372 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 YIPF1Q9Y548 306 aa17.99■□□□□ 0.47
SSH1-208ENST00000548522 TIMM13Q9Y5L4 95 aaPredicted RBP17.99■□□□□ 0.47
SSH1-208ENST00000548522 CACNA1BQ00975 2339 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 ARNTLO00327 626 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 ZNF197O14709 1029 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 MICAL2O94851 1124 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 CXCL8P10145 99 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 CPB1P15086 417 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 PSMC3P17980 439 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 RPL9P32969 192 aaKnown RBP17.98■□□□□ 0.47
SSH1-208ENST00000548522 TRAPPC10P48553 1259 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 SATB1Q01826 763 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 GNL2Q13823 731 aaKnown RBP17.98■□□□□ 0.47
SSH1-208ENST00000548522 WDR44Q5JSH3 913 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 STXBP5Q5T5C0 1151 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 CYP4A22Q5TCH4 519 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 C1orf186Q6ZWK4 172 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 GPIHBP1Q8IV16 184 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 FAM3CQ92520 227 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 IRF7Q92985 503 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 DRC1Q96MC2 740 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 PGLYRP2Q96PD5 576 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 LIMCH1Q9UPQ0 1083 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 DNM3Q9UQ16 869 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 TICRRQ7Z2Z1 1910 aa17.98■□□□□ 0.47
SSH1-208ENST00000548522 MAN2B1O00754 1011 aa17.97■□□□□ 0.47
SSH1-208ENST00000548522 HOXC13P31276 330 aa17.97■□□□□ 0.47
SSH1-208ENST00000548522 SOX9P48436 509 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms