RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 IL18RAPO95256 599 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 LDHAP00338 332 aaKnown RBP12.82□□□□□ -0.36
RAB5C-204ENST00000547517 RPN1P04843 607 aaKnown RBP12.82□□□□□ -0.36
RAB5C-204ENST00000547517 MYL1P05976 194 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 SPATA31D3P0C874 917 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 CBX2Q14781 532 aaPredicted RBP12.82□□□□□ -0.36
RAB5C-204ENST00000547517 BMT2Q1RMZ1 405 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 VARS2Q5ST30 1063 aaKnown RBP12.82□□□□□ -0.36
RAB5C-204ENST00000547517 SPATA1Q5VX52 437 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 CES5AQ6NT32 575 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 ELMSAN1Q6PJG2 1045 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 SPATA31D4Q6ZUB0 917 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 ANKS3Q6ZW76 656 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 HS2ST1Q7LGA3 356 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 KIAA0895Q8NCT3 520 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 FEZF2Q8TBJ5 459 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 ZNF507Q8TCN5 953 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 SUSD3Q96L08 255 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 TSPAN18Q96SJ8 248 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 POP1Q99575 1024 aaKnown RBP12.82□□□□□ -0.36
RAB5C-204ENST00000547517 ADAM7Q9H2U9 754 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 AGPAT3Q9NRZ7 376 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 HSPBP1Q9NZL4 362 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 MTRRQ9UBK8 725 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 PRKAG3Q9UGI9 489 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 DERAQ9Y315 318 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 C2CD2Q9Y426 696 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 TTC28Q96AY4 2481 aa12.82□□□□□ -0.36
RAB5C-204ENST00000547517 SYN3O14994 580 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 KIAA0391O15091 583 aaKnown RBP12.81□□□□□ -0.36
RAB5C-204ENST00000547517 CLIC2O15247 247 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 TGFB1I1O43294 461 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 SP100P23497 879 aaPredicted RBP12.81□□□□□ -0.36
RAB5C-204ENST00000547517 CYP2J2P51589 502 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 TFAMQ00059 246 aaKnown RBP12.81□□□□□ -0.36
RAB5C-204ENST00000547517 POU5F1Q01860 360 aaKnown RBP12.81□□□□□ -0.36
RAB5C-204ENST00000547517 ITIH3Q06033 890 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 DPYDQ12882 1025 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 STK4Q13043 487 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 C9orf57Q5W0N0 161 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 CBWD2Q8IUF1 395 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 GJD3Q8N144 294 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 CCDC47Q96A33 483 aaKnown RBP12.81□□□□□ -0.36
RAB5C-204ENST00000547517 FAM84AQ96KN4 292 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 CLSTN3Q9BQT9 956 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 POMKQ9H5K3 350 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 CD320Q9NPF0 282 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 CDY1Q9Y6F8 540 aa12.81□□□□□ -0.36
RAB5C-204ENST00000547517 RFPL2O75678 378 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 OR1D2P34982 312 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 KNOP1Q1ED39 458 aaKnown RBP12.8□□□□□ -0.36
RAB5C-204ENST00000547517 LIN9Q5TKA1 542 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 RSPO2Q6UXX9 243 aaPredicted RBP12.8□□□□□ -0.36
RAB5C-204ENST00000547517 DSTYKQ6XUX3 929 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 FMR1NBQ8N0W7 255 aaPredicted RBP12.8□□□□□ -0.36
RAB5C-204ENST00000547517 KREMEN2Q8NCW0 462 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 CCDC34Q96HJ3 373 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 RPGRIP1Q96KN7 1286 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 RIPOR3Q96MK2 946 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 PHF7Q9BWX1 381 aaPredicted RBP12.8□□□□□ -0.36
RAB5C-204ENST00000547517 PDE11AQ9HCR9 933 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 TSHZ2Q9NRE2 1034 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 DPP3Q9NY33 737 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 CHMP5Q9NZZ3 219 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 DPP7Q9UHL4 492 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 FBXW11Q9UKB1 542 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 PCDHB8Q9UN66 801 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 TIMM13Q9Y5L4 95 aaPredicted RBP12.8□□□□□ -0.36
RAB5C-204ENST00000547517 BACE2Q9Y5Z0 518 aa12.8□□□□□ -0.36
RAB5C-204ENST00000547517 TSC2P49815 1807 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 ANO9A1A5B4 782 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 ZNF233A6NK53 670 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 H7C4K7 107 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 SPTLC1O15269 473 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 MTHFRP42898 656 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 AARSP49588 968 aaKnown RBP eCLIP12.79□□□□□ -0.36
RAB5C-204ENST00000547517 ARPP19P56211 112 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 FAM160A1Q05DH4 1040 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 PSMD2Q13200 908 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 PNOCQ13519 176 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 SNRNP35Q16560 246 aaKnown RBP12.79□□□□□ -0.36
RAB5C-204ENST00000547517 CTXN3Q4LDR2 81 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 LMBRD2Q68DH5 695 aaPredicted RBP12.79□□□□□ -0.36
RAB5C-204ENST00000547517 ZNF280DQ6N043 979 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 GPR149Q86SP6 731 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 NT5DC4Q86YG4 428 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 APPL2Q8NEU8 664 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 NECTIN4Q96NY8 510 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 MTMR12Q9C0I1 747 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 PLEKHA4Q9H4M7 779 aa12.79□□□□□ -0.36
RAB5C-204ENST00000547517 CCDC195A0A1B0GUA6 201 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 C19orf67A6NJJ6 358 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 M0QZQ0 153 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 PIRO00625 290 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 RHOBTB3O94955 611 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 ITGB3P05106 788 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 C8AP07357 584 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 TMEM191BP0C7N4 346 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 ODC1P11926 461 aa12.78□□□□□ -0.36
RAB5C-204ENST00000547517 POLR2BP30876 1174 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms