RNA–Protein interactions for RNA: ENST00000547372.5

RBFOX1-208, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 5 BASIC

Gene RBFOX1, Length 3,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-208ENST00000547372 SFI1A8K8P3 1242 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 ATMINO43313 823 aaPredicted RBP12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 COL6A2P12110 1019 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 CHRNB2P17787 502 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 STT3AP46977 705 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 CETN1Q12798 172 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 MOGSQ13724 837 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 NADK2Q4G0N4 442 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 SFT2D3Q587I9 215 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 RABGAP1LQ5R372 815 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 ZNF746Q6NUN9 644 aaPredicted RBP12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 PATL1Q86TB9 770 aaKnown RBP12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 CCDC110Q8TBZ0 833 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 GAB3Q8WWW8 586 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 CNBD2Q96M20 576 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 ZMAT2Q96NC0 199 aaKnown RBP12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 SHCBP1LQ9BZQ2 653 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 ANLNQ9NQW6 1124 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 TAS2R14Q9NYV8 317 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 TRIM17Q9Y577 477 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 E9PMD0 336 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 PTGIRP43119 386 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 CHRNDQ07001 517 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 SLC45A4Q5BKX6 768 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 SLC44A5Q8NCS7 719 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 ZNF75CPQ92670 426 aaPredicted RBP12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 PRPF18Q99633 342 aaKnown RBP12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 ISCA1Q9BUE6 129 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 PTTG2Q9NZH5 202 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 PPARGC1AQ9UBK2 798 aaKnown RBP12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 ZBTB21Q9ULJ3 1066 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 GRID1Q9ULK0 1009 aa12.62□□□□□ -0.39
RBFOX1-208ENST00000547372 DDX3YO15523 660 aaKnown RBP12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 PDGFRBP09619 1106 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 CTNNA2P26232 953 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 COILP38432 576 aaPredicted RBP12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 EVX2Q03828 476 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 CYTH1Q15438 398 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 HSP90AA5PQ58FG0 334 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 TRIM59Q8IWR1 403 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 ZFP28Q8NHY6 868 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 TGFBRAP1Q8WUH2 860 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 TRAIPQ9BWF2 469 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 TRIM55Q9BYV6 548 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 ZNF287Q9HBT7 754 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 SMIM31A0A1B0GVY4 71 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 TTLL13PA6NNM8 815 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 H3BSA7 217 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 VCAM1P19320 739 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 THOC7Q6I9Y2 204 aaKnown RBP12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 CPNE8Q86YQ8 564 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 ZDHHC14Q8IZN3 488 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 POU5F2Q8N7G0 328 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 VGLL2Q8N8G2 317 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 GSTCDQ8NEC7 633 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 CASP10Q92851 521 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 TRIM11Q96F44 468 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 PIGSQ96S52 555 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 USP29Q9HBJ7 922 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 BLOC1S4Q9NUP1 217 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 ANKFY1Q9P2R3 1169 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 FER1L4A9Z1Z3 1794 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 SIPA1L3O60292 1781 aaPredicted RBP12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 A0A1W2PPM1 405 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 G3V3G9 751 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 VILLO15195 856 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 CLDN3O15551 220 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 CHMP2AO43633 222 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 IFNB1P01574 187 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 PRKCIP41743 596 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 CD97P48960 835 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 EIF2B2P49770 351 aaKnown RBP12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 PICALMQ13492 652 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 ATP1A4Q13733 1029 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 KIF22Q14807 665 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 SGO2Q562F6 1265 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 DCAF8Q5TAQ9 597 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 DEPTORQ8TB45 409 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 RBM15Q96T37 977 aaKnown RBP eCLIP12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 DRC3Q9H069 523 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 CYP4F11Q9HBI6 524 aa12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 MARCOQ9UEW3 520 aaPredicted RBP12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 DIS3Q9Y2L1 958 aaKnown RBP12.61□□□□□ -0.39
RBFOX1-208ENST00000547372 A0A0A6YYK5 440 aaPredicted RBP12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 MEI4A8MW99 385 aa12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 FAM13AO94988 1023 aa12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 TDP2O95551 362 aa12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 ADRA1DP25100 572 aa12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 GSTM4Q03013 218 aa12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 GRB10Q13322 594 aa12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 IFNLR1Q8IU57 520 aaPredicted RBP12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 RAVER1Q8IY67 606 aaKnown RBP12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 RIN3Q8TB24 985 aa12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 ART4Q93070 314 aa12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 RILPQ96NA2 401 aa12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 DCUN1D5Q9BTE7 237 aa12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 HEMGNQ9BXL5 484 aa12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 STK32BQ9NY57 414 aa12.6□□□□□ -0.39
RBFOX1-208ENST00000547372 NINJ2Q9NZG7 142 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms