RNA–Protein interactions for RNA: ENST00000547148.5

PFKM-208, Transcript of phosphofructokinase, muscle, humanhuman

TSL 3

Gene PFKM, Length 775 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKM-208ENST00000547148 NCOA4Q13772 614 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 PTPN21Q16825 1174 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 UPP1Q16831 310 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 FKBP15Q5T1M5 1219 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 DPY19L2P1Q6NXN4 242 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 COLGALT2Q8IYK4 626 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 SP7Q8TDD2 431 aaPredicted RBP12.85□□□□□ -0.35
PFKM-208ENST00000547148 FAM161BQ96MY7 647 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 PAAF1Q9BRP4 392 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 INTS2Q9H0H0 1204 aaKnown RBP12.85□□□□□ -0.35
PFKM-208ENST00000547148 XYLT2Q9H1B5 865 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 NRDE2Q9H7Z3 1164 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 RAB20Q9NX57 234 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 GCNT4Q9P109 453 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 DNAJB4Q9UDY4 337 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 SIK3Q9Y2K2 1263 aa12.85□□□□□ -0.35
PFKM-208ENST00000547148 SPTBN5Q9NRC6 3674 aaKnown RBP12.84□□□□□ -0.35
PFKM-208ENST00000547148 A0A1W2PQC6 194 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 PODXLO00592 558 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 CBFA2T2O43439 604 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 ASS1P00966 412 aaKnown RBP12.84□□□□□ -0.35
PFKM-208ENST00000547148 CST3P01034 146 aaPredicted RBP12.84□□□□□ -0.35
PFKM-208ENST00000547148 KRT19P08727 400 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 IGFBP6P24592 240 aaPredicted RBP12.84□□□□□ -0.35
PFKM-208ENST00000547148 PON1P27169 355 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 RPL9P32969 192 aaKnown RBP12.84□□□□□ -0.35
PFKM-208ENST00000547148 PIK3CAP42336 1068 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 KLK7P49862 253 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 CLCNKBP51801 687 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 ZNF75DP51815 510 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 MYL6P60660 151 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 RBP5P82980 135 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 PLCB2Q00722 1185 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 RNASELQ05823 741 aaKnown RBP12.84□□□□□ -0.35
PFKM-208ENST00000547148 SYCP1Q15431 976 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 EXOC3L4Q17RC7 722 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 ZNF697Q5TEC3 545 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 GBP6Q6ZN66 633 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 LRRC52Q8N7C0 313 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 C3orf58Q8NDZ4 430 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 MAFAQ8NHW3 353 aaPredicted RBP12.84□□□□□ -0.35
PFKM-208ENST00000547148 UROC1Q96N76 676 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 ERGIC2Q96RQ1 377 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 YME1L1Q96TA2 773 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 CRACR2AQ9BSW2 395 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 TRIM5Q9C035 493 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 CWH43Q9H720 699 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 APOBEC3GQ9HC16 384 aaKnown RBP12.84□□□□□ -0.35
PFKM-208ENST00000547148 AGAP1Q9UPQ3 857 aa12.84□□□□□ -0.35
PFKM-208ENST00000547148 MRPL42Q9Y6G3 142 aaKnown RBP12.84□□□□□ -0.35
PFKM-208ENST00000547148 FNDC1Q4ZHG4 1894 aaPredicted RBP12.83□□□□□ -0.36
PFKM-208ENST00000547148 F8W810 466 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 PHACTR2O75167 634 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 STAU1O95793 577 aaKnown RBP12.83□□□□□ -0.36
PFKM-208ENST00000547148 TPM3P06753 285 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 LINC00271P0C7V0 271 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 SLC9A1P19634 815 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 MRE11P49959 708 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 NOP14P78316 857 aaKnown RBP12.83□□□□□ -0.36
PFKM-208ENST00000547148 APBA1Q02410 837 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 CETN1Q12798 172 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 TRPC3Q13507 836 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 BTG3Q14201 252 aaPredicted RBP12.83□□□□□ -0.36
PFKM-208ENST00000547148 TRIM65Q6PJ69 517 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 CD300LGQ6UXG3 332 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 EHBP1Q8NDI1 1231 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 RABGGTAQ92696 567 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 ELMO3Q96BJ8 720 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 DDX27Q96GQ7 796 aaKnown RBP12.83□□□□□ -0.36
PFKM-208ENST00000547148 MRFAP1L1Q96HT8 127 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 FAM193BQ96PV7 902 aaPredicted RBP12.83□□□□□ -0.36
PFKM-208ENST00000547148 RAD9AQ99638 391 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 TMEM175Q9BSA9 504 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 PI4K2AQ9BTU6 479 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 VRTNQ9H8Y1 702 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 SIX2Q9NPC8 291 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 MARCH5Q9NX47 278 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 INSL6Q9Y581 213 aa12.83□□□□□ -0.36
PFKM-208ENST00000547148 LCHNA4D1U4 455 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 GRXCR1A8MXD5 290 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 TMEM189-UBE2V1I3L0A0 370 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 SPTLC1O15269 473 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 TLL1O43897 1013 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 ZC3H11AO75152 810 aaKnown RBP eCLIP12.82□□□□□ -0.36
PFKM-208ENST00000547148 KIF4AO95239 1232 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 ITGB1P05556 798 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 GALTP07902 379 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 ATICP31939 592 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 SLC11A1P49279 550 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 AARSP49588 968 aaKnown RBP eCLIP12.82□□□□□ -0.36
PFKM-208ENST00000547148 ZNF699Q32M78 642 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 SPOPLQ6IQ16 392 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 VSTM4Q8IW00 320 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 TAF4BQ92750 862 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 HPDLQ96IR7 371 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 ZNF560Q96MR9 790 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 ZBED2Q9BTP6 218 aa12.82□□□□□ -0.36
PFKM-208ENST00000547148 LSM14BQ9BX40 385 aaKnown RBP12.82□□□□□ -0.36
PFKM-208ENST00000547148 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.82□□□□□ -0.36
PFKM-208ENST00000547148 RAPGEFL1Q9UHV5 662 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms