RNA–Protein interactions for RNA: ENST00000546849.1

NPAS3-204, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 3

Gene NPAS3, Length 464 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-204ENST00000546849 GJB1P08034 283 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 SBK3P0C264 359 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 KITP10721 976 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 BRAFP15056 766 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 PHKA1P46020 1223 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 CTSWP56202 376 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 SOX8P57073 446 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 PSMC1P62191 440 aaKnown RBP7.58□□□□□ -1.2
NPAS3-204ENST00000546849 HABP2Q14520 560 aaPredicted RBP7.58□□□□□ -1.2
NPAS3-204ENST00000546849 UTP14CQ5TAP6 766 aaKnown RBP7.58□□□□□ -1.2
NPAS3-204ENST00000546849 PPP1R3BQ86XI6 285 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 FAM90A1Q86YD7 464 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 Q8TCH9 128 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 NT5C1BQ96P26 610 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 SIK2Q9H0K1 926 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 NUP62CLQ9H1M0 184 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 RSAD1Q9HA92 442 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 DDX21Q9NR30 783 aaKnown RBP eCLIP7.58□□□□□ -1.2
NPAS3-204ENST00000546849 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.58□□□□□ -1.2
NPAS3-204ENST00000546849 RLIMQ9NVW2 624 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 SNX13Q9Y5W8 968 aa7.58□□□□□ -1.2
NPAS3-204ENST00000546849 ANO9A1A5B4 782 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 ZNF785A8K8V0 405 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 APAF1O14727 1248 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 SLC43A1O75387 559 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 ANXA1P04083 346 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 RARBP10826 455 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 SELENOPP49908 381 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 CHN2P52757 468 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 EXOSC9Q06265 439 aaKnown RBP7.57□□□□□ -1.2
NPAS3-204ENST00000546849 IFIT5Q13325 482 aaKnown RBP7.57□□□□□ -1.2
NPAS3-204ENST00000546849 GALEQ14376 348 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 IL31Q6EBC2 164 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 ZNF585AQ6P3V2 769 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 GPRIN1Q7Z2K8 1008 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 APOL5Q9BWW9 433 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 KRTAP9-3Q9BYQ3 159 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 KRTAP4-5Q9BYR2 181 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 BHMT2Q9H2M3 363 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 KIAA1586Q9HCI6 787 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 ST6GALNAC2Q9UJ37 374 aa7.57□□□□□ -1.2
NPAS3-204ENST00000546849 RECQL4O94761 1208 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 AGFG2O95081 481 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 MYL3P08590 195 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 SPATA31D3P0C874 917 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 BUD31P41223 144 aaPredicted RBP7.56□□□□□ -1.2
NPAS3-204ENST00000546849 MXRA7P84157 204 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 SEMA5AQ13591 1074 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 ICAM4Q14773 271 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 SLC44A4Q53GD3 710 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 SYCP2LQ5T4T6 812 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 APOA5Q6Q788 366 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 ZNF783Q6ZMS7 281 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 SPATA31D4Q6ZUB0 917 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 TNIP3Q96KP6 325 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 MNTQ99583 582 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 IMPG2Q9BZV3 1241 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 ZNF287Q9HBT7 754 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 ABCC9O60706 1549 aa7.56□□□□□ -1.2
NPAS3-204ENST00000546849 PNPLA7Q6ZV29 1317 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 DRGXA6NNA5 263 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 MYO1CO00159 1063 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 FRS3O43559 492 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 SLC6A2P23975 617 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 NEK3P51956 506 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 ZNF135P52742 658 aaPredicted RBP7.55□□□□□ -1.2
NPAS3-204ENST00000546849 NHLH2Q02577 135 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 UBE4AQ14139 1066 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 PRKD1Q15139 912 aaPredicted RBP7.55□□□□□ -1.2
NPAS3-204ENST00000546849 SWSAP1Q6NVH7 229 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 PDSS2Q86YH6 399 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 SLC17A8Q8NDX2 589 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 OR6B3Q8NGW1 331 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 IL31RAQ8NI17 732 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 DDX17Q92841 729 aaKnown RBP7.55□□□□□ -1.2
NPAS3-204ENST00000546849 SUCLG2Q96I99 432 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 C22orf23Q9BZE7 217 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 FAM30AQ9NZY2 134 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 SRRDQ9UH36 339 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 ATP11BQ9Y2G3 1177 aa7.55□□□□□ -1.2
NPAS3-204ENST00000546849 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.55□□□□□ -1.2
NPAS3-204ENST00000546849 RHPN2P1A8MT19 583 aa7.54□□□□□ -1.2
NPAS3-204ENST00000546849 MUSKO15146 869 aa7.54□□□□□ -1.2
NPAS3-204ENST00000546849 MATN4O95460 622 aa7.54□□□□□ -1.2
NPAS3-204ENST00000546849 KIF22Q14807 665 aa7.54□□□□□ -1.2
NPAS3-204ENST00000546849 FOXR2Q6PJQ5 311 aa7.54□□□□□ -1.2
NPAS3-204ENST00000546849 MAMDC4Q6UXC1 1216 aa7.54□□□□□ -1.2
NPAS3-204ENST00000546849 Q6ZRM9 215 aa7.54□□□□□ -1.2
NPAS3-204ENST00000546849 CELF5Q8N6W0 485 aaKnown RBP7.54□□□□□ -1.2
NPAS3-204ENST00000546849 DNERQ8NFT8 737 aa7.54□□□□□ -1.2
NPAS3-204ENST00000546849 CXorf38Q8TB03 319 aa7.54□□□□□ -1.2
NPAS3-204ENST00000546849 FBXO41Q8TF61 875 aa7.54□□□□□ -1.2
NPAS3-204ENST00000546849 EDAQ92838 391 aa7.54□□□□□ -1.2
NPAS3-204ENST00000546849 DCLRE1CQ96SD1 692 aaKnown RBP7.54□□□□□ -1.2
NPAS3-204ENST00000546849 RBM15Q96T37 977 aaKnown RBP eCLIP7.54□□□□□ -1.2
NPAS3-204ENST00000546849 MPHOSPH6Q99547 160 aaKnown RBP7.54□□□□□ -1.2
NPAS3-204ENST00000546849 SSBP3Q9BWW4 388 aaPredicted RBP7.54□□□□□ -1.2
NPAS3-204ENST00000546849 CNOT11Q9UKZ1 510 aaKnown RBP7.54□□□□□ -1.2
NPAS3-204ENST00000546849 SORCS3Q9UPU3 1222 aa7.54□□□□□ -1.2
NPAS3-204ENST00000546849 CDYLQ9Y232 598 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms