RNA–Protein interactions for RNA: ENST00000546697.1

SSH1-204, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-204ENST00000546697 TMC5Q6UXY8 1006 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 STXBP4Q6ZWJ1 553 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 PLCD3Q8N3E9 789 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 SPRYD3Q8NCJ5 442 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 BEST2Q8NFU1 509 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 FEZF2Q8TBJ5 459 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 KIF12Q96FN5 646 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 PRKD2Q9BZL6 878 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 SCAND2PQ9GZW5 306 aaPredicted RBP16.65■□□□□ 0.26
SSH1-204ENST00000546697 IKZF4Q9H2S9 585 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 PCDHB8Q9UN66 801 aa16.65■□□□□ 0.26
SSH1-204ENST00000546697 CCDC195A0A1B0GUA6 201 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 A0A1W2PQ27 194 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 A0A1W2PQ64 194 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 A0A1W2PQD8 194 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 PRR33A8MZF0 331 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 IL18RAPO95256 599 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 MATR3P43243 847 aaKnown RBP eCLIP16.64■□□□□ 0.25
SSH1-204ENST00000546697 BECN1Q14457 450 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 VARS2Q5ST30 1063 aaKnown RBP16.64■□□□□ 0.25
SSH1-204ENST00000546697 KANK3Q6NY19 840 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 BMP8AQ7Z5Y6 402 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 BRSK2Q8IWQ3 736 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 ZNF461Q8TAF7 563 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 POMGNT1Q8WZA1 660 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 EDAQ92838 391 aa16.64■□□□□ 0.25
SSH1-204ENST00000546697 ARIH1Q9Y4X5 557 aaPredicted RBP16.64■□□□□ 0.25
SSH1-204ENST00000546697 TECTAO75443 2155 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 ARHGEF37A1IGU5 675 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 C2CD4DB7Z1M9 353 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 H7C4K7 107 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 TYMPP19971 482 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 OR1D2P34982 312 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 ACOT2P49753 483 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 LILRA4P59901 499 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 PTPN21Q16825 1174 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 FAM26FQ5R3K3 315 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 TPGS2Q68CL5 300 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 JADE1Q6IE81 842 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 CCDC149Q6ZUS6 474 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 CEP57Q86XR8 500 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 PALB2Q86YC2 1186 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 C12orf56Q8IXR9 622 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 APPL2Q8NEU8 664 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 CXorf38Q8TB03 319 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 STAMQ92783 540 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 RPGRIP1Q96KN7 1286 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 SPATA32Q96LK8 384 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 LRFN3Q9BTN0 628 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 APOL5Q9BWW9 433 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 EPS15L1Q9UBC2 864 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 MUTYHQ9UIF7 546 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 NUB1Q9Y5A7 615 aa16.63■□□□□ 0.25
SSH1-204ENST00000546697 KLRC4O43908 158 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 EXTL3O43909 919 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 RFPL2O75678 378 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 CYP11A1P05108 521 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 NFICP08651 508 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 ATF2P15336 505 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 ROR1Q01973 937 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 TMEM132DQ14C87 1099 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 FOXD4L6Q3SYB3 417 aaPredicted RBP16.62■□□□□ 0.25
SSH1-204ENST00000546697 TMEM31Q5JXX7 168 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 C9orf57Q5W0N0 161 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 FOXD4L3Q6VB84 417 aaPredicted RBP16.62■□□□□ 0.25
SSH1-204ENST00000546697 OTOP3Q7RTS5 596 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 EFCAB13Q8IY85 973 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 TCEAL8Q8IYN2 117 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 GLIS3Q8NEA6 775 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 BORCS6Q96GS4 357 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 AVENQ9NQS1 362 aaPredicted RBP16.62■□□□□ 0.25
SSH1-204ENST00000546697 TBC1D7Q9P0N9 293 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 CGNQ9P2M7 1197 aaKnown RBP16.62■□□□□ 0.25
SSH1-204ENST00000546697 FBXL5Q9UKA1 691 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 CDY1Q9Y6F8 540 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 CLUHO75153 1309 aa16.62■□□□□ 0.25
SSH1-204ENST00000546697 TCHHQ07283 1943 aa16.61■□□□□ 0.25
SSH1-204ENST00000546697 WDR27A2RRH5 827 aa16.61■□□□□ 0.25
SSH1-204ENST00000546697 I3L4J1 428 aa16.61■□□□□ 0.25
SSH1-204ENST00000546697 TGFB1I1O43294 461 aa16.61■□□□□ 0.25
SSH1-204ENST00000546697 N4BP1O75113 896 aaKnown RBP16.61■□□□□ 0.25
SSH1-204ENST00000546697 PRPF6O94906 941 aaKnown RBP16.61■□□□□ 0.25
SSH1-204ENST00000546697 WEE2P0C1S8 567 aa16.61■□□□□ 0.25
SSH1-204ENST00000546697 PFKFB1P16118 471 aa16.61■□□□□ 0.25
SSH1-204ENST00000546697 ASIC1P78348 528 aa16.61■□□□□ 0.25
SSH1-204ENST00000546697 ZXDAP98168 799 aa16.61■□□□□ 0.25
SSH1-204ENST00000546697 TDRD5Q8NAT2 981 aaKnown RBP16.61■□□□□ 0.25
SSH1-204ENST00000546697 SCFD1Q8WVM8 642 aa16.61■□□□□ 0.25
SSH1-204ENST00000546697 SMG7Q92540 1137 aaKnown RBP16.61■□□□□ 0.25
SSH1-204ENST00000546697 CBWD1Q9BRT8 395 aa16.61■□□□□ 0.25
SSH1-204ENST00000546697 ZFP37Q9Y6Q3 630 aaPredicted RBP16.61■□□□□ 0.25
SSH1-204ENST00000546697 DOCK8Q8NF50 2099 aa16.61■□□□□ 0.25
SSH1-204ENST00000546697 TSC2P49815 1807 aa16.61■□□□□ 0.25
SSH1-204ENST00000546697 PPEF2O14830 753 aa16.6■□□□□ 0.25
SSH1-204ENST00000546697 SPTLC1O15269 473 aa16.6■□□□□ 0.25
SSH1-204ENST00000546697 C8AP07357 584 aa16.6■□□□□ 0.25
SSH1-204ENST00000546697 MCM4P33991 863 aa16.6■□□□□ 0.25
SSH1-204ENST00000546697 WNT7BP56706 349 aa16.6■□□□□ 0.25
SSH1-204ENST00000546697 NUCB2P80303 420 aa16.6■□□□□ 0.25
SSH1-204ENST00000546697 SPAG1Q07617 926 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms