RNA–Protein interactions for RNA: ENST00000546588.1

VPS29-203, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-203ENST00000546588 TTYH3Q9C0H2 523 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 POLR3FQ9H1D9 316 aaPredicted RBP9.19□□□□□ -0.94
VPS29-203ENST00000546588 RNPEPQ9H4A4 650 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 METTL14Q9HCE5 456 aaKnown RBP9.19□□□□□ -0.94
VPS29-203ENST00000546588 GPRC5CQ9NQ84 441 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 HCN2Q9UL51 889 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 TBX20Q9UMR3 447 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 SH3BP1Q9Y3L3 701 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 TRIP11Q15643 1979 aa9.19□□□□□ -0.94
VPS29-203ENST00000546588 DCDC2BA2VCK2 349 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 GTPBP10A4D1E9 387 aaKnown RBP9.18□□□□□ -0.94
VPS29-203ENST00000546588 RRN3P2A6NIE6 340 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 C1QTNF9BB2RNN3 333 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 KHNYNO15037 678 aaKnown RBP9.18□□□□□ -0.94
VPS29-203ENST00000546588 CETN3O15182 167 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 ADCY3O60266 1144 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 STK10O94804 968 aaKnown RBP9.18□□□□□ -0.94
VPS29-203ENST00000546588 PRPF6O94906 941 aaKnown RBP9.18□□□□□ -0.94
VPS29-203ENST00000546588 HMGCRP04035 888 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 RARAP10276 462 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 PROZP22891 400 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 HOXD10P28358 340 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 CYP2C19P33261 490 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 EFNA5P52803 228 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 PEX3P56589 373 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 GSDMDP57764 484 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 PURAQ00577 322 aaKnown RBP9.18□□□□□ -0.94
VPS29-203ENST00000546588 POU5F1Q01860 360 aaKnown RBP9.18□□□□□ -0.94
VPS29-203ENST00000546588 SP4Q02446 784 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 SFSWAPQ12872 951 aaKnown RBP9.18□□□□□ -0.94
VPS29-203ENST00000546588 CAPSQ13938 189 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 CCINQ13939 588 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 GRIN2CQ14957 1233 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 PCBP1Q15365 356 aaKnown RBP eCLIP9.18□□□□□ -0.94
VPS29-203ENST00000546588 TPD52L1Q16890 204 aaPredicted RBP9.18□□□□□ -0.94
VPS29-203ENST00000546588 ZC2HC1CQ53FD0 456 aaPredicted RBP9.18□□□□□ -0.94
VPS29-203ENST00000546588 MARCH8Q5T0T0 291 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 FAM102BQ5T8I3 360 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 MFSD14CQ5VZR4 134 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 SPECC1LQ69YQ0 1117 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 SLC39A4Q6P5W5 647 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 ZPBP2Q6X784 338 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 ERMP1Q7Z2K6 904 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 APBB1IPQ7Z5R6 666 aaPredicted RBP9.18□□□□□ -0.94
VPS29-203ENST00000546588 RPAINQ86UA6 219 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 CD163Q86VB7 1156 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 EGFL6Q8IUX8 553 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 OTUD6BQ8N6M0 293 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 KLHDC9Q8NEP7 349 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 ASAP3Q8TDY4 903 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 NRCAMQ92823 1304 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 IFT74Q96LB3 600 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 ZNF830Q96NB3 372 aaPredicted RBP9.18□□□□□ -0.94
VPS29-203ENST00000546588 TMX1Q9H3N1 280 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 KMT5AQ9NQR1 393 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 KCND1Q9NSA2 647 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 TBC1D7Q9P0N9 293 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 FBXL5Q9UKA1 691 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 EXOC7Q9UPT5 735 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 DAAM1Q9Y4D1 1078 aa9.18□□□□□ -0.94
VPS29-203ENST00000546588 A0A1W2PQJ5 194 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 DENND3A2RUS2 1198 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 ABLIM1O14639 778 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 SLC16A4O15374 487 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 TEX33O43247 280 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 FAM189A1O60320 539 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 MSCO60682 206 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 MMP20O60882 483 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 FBXO24O75426 580 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 AKAP3O75969 853 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 TBC1D8O95759 1140 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 RPLP2P05387 115 aaKnown RBP9.17□□□□□ -0.94
VPS29-203ENST00000546588 INSRRP14616 1297 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 ITGB7P26010 798 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 CNGA1P29973 690 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 ADSSP30520 456 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 CDC42EP1Q00587 391 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 CACNB2Q08289 660 aaPredicted RBP9.17□□□□□ -0.94
VPS29-203ENST00000546588 ADAM9Q13443 819 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 ARHGEF6Q15052 776 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 FILIP1LQ4L180 1135 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 KIAA0319Q5VV43 1072 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 TAF3Q5VWG9 929 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 DPY19L2P1Q6NXN4 242 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 RELL1Q8IUW5 271 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 NELFCDQ8IXH7 590 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 SDR16C5Q8N3Y7 309 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 CCDC150Q8NCX0 1101 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 PSPC1Q8WXF1 523 aaKnown RBP9.17□□□□□ -0.94
VPS29-203ENST00000546588 SLC35C1Q96A29 364 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 ARMC5Q96C12 935 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 SH2D3AQ9BRG2 576 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 SPON2Q9BUD6 331 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 C2orf40Q9H1Z8 148 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 NDST4Q9H3R1 872 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 FZD8Q9H461 694 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 SIK3Q9Y2K2 1263 aa9.17□□□□□ -0.94
VPS29-203ENST00000546588 CENPFP49454 3210 aa9.16□□□□□ -0.94
VPS29-203ENST00000546588 SMIM35A0A1B0GVV1 85 aa9.16□□□□□ -0.94
VPS29-203ENST00000546588 ANKRD62A6NC57 917 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms