RNA–Protein interactions for RNA: ENST00000546537.6

TMEM116-203, Transcript of transmembrane protein 116, humanhuman

TSL 5

Gene TMEM116, Length 599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-203ENST00000546537 ASAH2Q9NR71 780 aa11.93□□□□□ -0.5
TMEM116-203ENST00000546537 CEP72Q9P209 647 aa11.93□□□□□ -0.5
TMEM116-203ENST00000546537 VAV3Q9UKW4 847 aa11.93□□□□□ -0.5
TMEM116-203ENST00000546537 SLC8A2Q9UPR5 921 aa11.93□□□□□ -0.5
TMEM116-203ENST00000546537 FAM221BA6H8Z2 402 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 I3L4J1 428 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 ZBTB39O15060 712 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 RECQL4O94761 1208 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 PRKCBP05771 671 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 GLRA2P23416 452 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 ARL2P36404 184 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 BRCC3P46736 316 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 CLCNKBP51801 687 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 FGD1P98174 961 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 KARSQ15046 597 aaKnown RBP11.92□□□□□ -0.5
TMEM116-203ENST00000546537 UPP1Q16831 310 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 ARHGAP29Q52LW3 1261 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 TPGS2Q68CL5 300 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 C19orf48Q6RUI8 117 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 DHX32Q7L7V1 743 aaKnown RBP11.92□□□□□ -0.5
TMEM116-203ENST00000546537 PIAS4Q8N2W9 510 aaPredicted RBP11.92□□□□□ -0.5
TMEM116-203ENST00000546537 C3orf58Q8NDZ4 430 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 SHKBP1Q8TBC3 707 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 ZFYVE19Q96K21 471 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 PRIMPOLQ96LW4 560 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 SLITRK6Q9H5Y7 841 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 VPS54Q9P1Q0 977 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 ASCC3Q8N3C0 2202 aaKnown RBP11.92□□□□□ -0.5
TMEM116-203ENST00000546537 THADAQ6YHU6 1953 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 PCNX2A6NKB5 2137 aa11.92□□□□□ -0.5
TMEM116-203ENST00000546537 HELZ2Q9BYK8 2649 aaKnown RBP11.91□□□□□ -0.5
TMEM116-203ENST00000546537 KIAA1549LQ6ZVL6 1849 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 KHNYNO15037 678 aaKnown RBP11.91□□□□□ -0.5
TMEM116-203ENST00000546537 DCLK1O15075 740 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 TBX3O15119 743 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 SLC37A4O43826 429 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 ARPP19P56211 112 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 TWF1Q12792 350 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 EPHA7Q15375 998 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 HAUS6Q7Z4H7 955 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 ARID3BQ8IVW6 561 aaPredicted RBP11.91□□□□□ -0.5
TMEM116-203ENST00000546537 UROC1Q96N76 676 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 LRRC3BQ96PB8 259 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 BBC3Q96PG8 261 aaPredicted RBP11.91□□□□□ -0.5
TMEM116-203ENST00000546537 PPP1R10Q96QC0 940 aaKnown RBP11.91□□□□□ -0.5
TMEM116-203ENST00000546537 TMEM209Q96SK2 561 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 LRRC3Q9BY71 257 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 SLKQ9H2G2 1235 aaPredicted RBP11.91□□□□□ -0.5
TMEM116-203ENST00000546537 PRMT7Q9NVM4 692 aaPredicted RBP11.91□□□□□ -0.5
TMEM116-203ENST00000546537 RGL1Q9NZL6 768 aa11.91□□□□□ -0.5
TMEM116-203ENST00000546537 DDX25Q9UHL0 483 aaKnown RBP11.91□□□□□ -0.5
TMEM116-203ENST00000546537 A0A1W2PRU2 124 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 DGAT1O75907 488 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 NLRP5P59047 1200 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 TNK2Q07912 1038 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 MRPL58Q14197 206 aaKnown RBP11.9□□□□□ -0.5
TMEM116-203ENST00000546537 COL28A1Q2UY09 1125 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 TMEM196Q5HYL7 178 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 DYDC2Q96IM9 177 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 FAM20AQ96MK3 541 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 RNF26Q9BY78 433 aaPredicted RBP11.9□□□□□ -0.5
TMEM116-203ENST00000546537 SLC32A1Q9H598 525 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 PDZD7Q9H5P4 517 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 ZSWIM4Q9H7M6 989 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 KCNMB3Q9NPA1 279 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 SH3GLB2Q9NR46 395 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 POLR3BQ9NW08 1133 aaPredicted RBP11.9□□□□□ -0.5
TMEM116-203ENST00000546537 OBP2AQ9NY56 170 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 AFF4Q9UHB7 1163 aaKnown RBP11.9□□□□□ -0.5
TMEM116-203ENST00000546537 FBXL5Q9UKA1 691 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 NAP1L2Q9ULW6 460 aaPredicted RBP11.9□□□□□ -0.5
TMEM116-203ENST00000546537 MAFFQ9ULX9 164 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 MYO16Q9Y6X6 1858 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 ABCA7Q8IZY2 2146 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 NID2Q14112 1375 aa11.9□□□□□ -0.5
TMEM116-203ENST00000546537 TNRC6BQ9UPQ9 1833 aaKnown RBP11.89□□□□□ -0.51
TMEM116-203ENST00000546537 TTLL13PA6NNM8 815 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 PATE3B3GLJ2 98 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 H7C4K7 107 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 M0R2N6 131 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 N4BP3O15049 544 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 IRX4P78413 519 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 PLCB2Q00722 1185 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 AKAP17AQ02040 695 aaKnown RBP11.89□□□□□ -0.51
TMEM116-203ENST00000546537 CACNB1Q02641 598 aaPredicted RBP11.89□□□□□ -0.51
TMEM116-203ENST00000546537 CTTNQ14247 550 aaKnown RBP11.89□□□□□ -0.51
TMEM116-203ENST00000546537 FAM187BQ17R55 369 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 UAP1L1Q3KQV9 507 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 GLRA4Q5JXX5 417 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 STXBP5Q5T5C0 1151 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 PMS2CLQ68D20 193 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 FSTL4Q6MZW2 842 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 TMC8Q8IU68 726 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 GPIHBP1Q8IV16 184 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 NOSTRINQ8IVI9 506 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 HHIPQ96QV1 700 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 MKNK1Q9BUB5 465 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 FZD8Q9H461 694 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 GOLGA2P5Q9HBQ8 144 aa11.89□□□□□ -0.51
TMEM116-203ENST00000546537 EBF1Q9UH73 591 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms