RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 SIX5Q8N196 739 aa8.35□□□□□ -1.07
UBR1-202ENST00000546274 METTL13Q8N6R0 699 aa8.35□□□□□ -1.07
UBR1-202ENST00000546274 SYT2Q8N9I0 419 aaPredicted RBP8.35□□□□□ -1.07
UBR1-202ENST00000546274 ANKLE1Q8NAG6 615 aa8.35□□□□□ -1.07
UBR1-202ENST00000546274 EPS8L3Q8TE67 593 aaKnown RBP8.35□□□□□ -1.07
UBR1-202ENST00000546274 DQX1Q8TE96 717 aaKnown RBP8.35□□□□□ -1.07
UBR1-202ENST00000546274 SREK1Q8WXA9 508 aaKnown RBP8.35□□□□□ -1.07
UBR1-202ENST00000546274 CASP10Q92851 521 aa8.35□□□□□ -1.07
UBR1-202ENST00000546274 SLC35C1Q96A29 364 aa8.35□□□□□ -1.07
UBR1-202ENST00000546274 ZNF184Q99676 751 aaPredicted RBP8.35□□□□□ -1.07
UBR1-202ENST00000546274 NAP1L4Q99733 375 aaKnown RBP8.35□□□□□ -1.07
UBR1-202ENST00000546274 PPP1R1BQ9UD71 204 aaPredicted RBP8.35□□□□□ -1.07
UBR1-202ENST00000546274 IVNS1ABPQ9Y6Y0 642 aa8.35□□□□□ -1.07
UBR1-202ENST00000546274 COL11A2P13942 1736 aaPredicted RBP8.35□□□□□ -1.07
UBR1-202ENST00000546274 GOLGB1Q14789 3259 aaKnown RBP8.35□□□□□ -1.07
UBR1-202ENST00000546274 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 FAM86B1E9PN63 330 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 TTI1O43156 1089 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 MARCH6O60337 910 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 OAS1P00973 400 aaKnown RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 PDGFRBP09619 1106 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 FAM86B2P0C5J1 330 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 RASSF2P50749 326 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 NEK2P51955 445 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 SH3BGRP55822 239 aaPredicted RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 NFIAQ12857 509 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 RBM26Q5T8P6 1007 aaKnown RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 DENND2CQ68D51 928 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 CDC42EP5Q6NZY7 148 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 COL23A1Q86Y22 540 aaPredicted RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 SIAH1Q8IUQ4 282 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 RASGEF1CQ8N431 466 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 MORC4Q8TE76 937 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP8.34□□□□□ -1.07
UBR1-202ENST00000546274 RSPH1Q8WYR4 309 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 STMN2Q93045 179 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 STK33Q9BYT3 514 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 LRMDAQ9H2I8 198 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 IKZF4Q9H2S9 585 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 TUBA8Q9NY65 449 aaPredicted RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 ARMCX3Q9UH62 379 aaPredicted RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 PRELID1Q9Y255 219 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 RBMX2Q9Y388 322 aaKnown RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 NOC2LQ9Y3T9 749 aaKnown RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 PCDHA1Q9Y5I3 950 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 CCDC169A6NNP5 214 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 DDX3XO00571 662 aaKnown RBP eCLIP8.34□□□□□ -1.07
UBR1-202ENST00000546274 PDXKO00764 312 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 BBOX1O75936 387 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 GJB6O95452 261 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 OXSR1O95747 527 aaPredicted RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 CDK4P11802 303 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 ITGA4P13612 1032 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 IDO1P14902 403 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 CREB1P16220 341 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 RPA1P27694 616 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 EPS15P42566 896 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 VPS41P49754 854 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 ARHGAP4P98171 946 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 DCTN2Q13561 401 aaKnown RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 PDE1CQ14123 709 aaPredicted RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 CLPPQ16740 277 aaPredicted RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 EXOC3L4Q17RC7 722 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 WASHC2DQ5SRD0 308 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 FAAH2Q6GMR7 532 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 ALKBH5Q6P6C2 394 aaKnown RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 IZUMO2Q6UXV1 221 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 SLFN12Q8IYM2 578 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 SLC30A5Q8TAD4 765 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 SEC14L1Q92503 715 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 PPP1R14BQ96C90 147 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 USP40Q9NVE5 1235 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 EURLQ9NYK6 297 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 FBXO9Q9UK97 447 aaPredicted RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 VAV3Q9UKW4 847 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 FAF1Q9UNN5 650 aaPredicted RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 WASF2Q9Y6W5 498 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 DKC1O60832 514 aaKnown RBP eCLIP8.34□□□□□ -1.07
UBR1-202ENST00000546274 SERPINB2P05120 415 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 STIP1P31948 543 aaKnown RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 PMS2P54278 862 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 NAA20P61599 178 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 PDE1BQ01064 536 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 SLC34A1Q06495 639 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 PPP2R5CQ13362 524 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 SLC29A2Q14542 456 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 USH1GQ495M9 461 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 TMEM259Q4ZIN3 620 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 PRR16Q569H4 304 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 APOBEC3HQ6NTF7 200 aaKnown RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 NT5DC3Q86UY8 548 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 NLGN1Q8N2Q7 840 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 LNX1Q8TBB1 728 aaPredicted RBP8.34□□□□□ -1.07
UBR1-202ENST00000546274 CCDC127Q96BQ5 260 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 HES6Q96HZ4 224 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 SMC6Q96SB8 1091 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 FMO2Q99518 471 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 TRIM51Q9BSJ1 452 aa8.34□□□□□ -1.07
UBR1-202ENST00000546274 RUSC1Q9BVN2 902 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms