RNA–Protein interactions for RNA: ENST00000546211.5

SKP2-208, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5 BASIC

Gene SKP2, Length 1,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-208ENST00000546211 BEST2Q8NFU1 509 aa20.86■□□□□ 0.93
SKP2-208ENST00000546211 KIF18AQ8NI77 898 aa20.86■□□□□ 0.93
SKP2-208ENST00000546211 SYT11Q9BT88 431 aa20.86■□□□□ 0.93
SKP2-208ENST00000546211 FAM105AQ9NUU6 356 aa20.86■□□□□ 0.93
SKP2-208ENST00000546211 SEPT11Q9NVA2 429 aaKnown RBP20.86■□□□□ 0.93
SKP2-208ENST00000546211 PCDHB4Q9Y5E5 795 aa20.86■□□□□ 0.93
SKP2-208ENST00000546211 PCDHB2Q9Y5E7 798 aa20.86■□□□□ 0.93
SKP2-208ENST00000546211 UMODL1Q5DID0 1318 aa20.86■□□□□ 0.93
SKP2-208ENST00000546211 HTTP42858 3142 aa20.86■□□□□ 0.93
SKP2-208ENST00000546211 RCCD1A6NED2 376 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 DDX3XO00571 662 aaKnown RBP eCLIP20.85■□□□□ 0.933e-12■■■■■ 59.2
SKP2-208ENST00000546211 XPOTO43592 962 aaKnown RBP20.85■□□□□ 0.93
SKP2-208ENST00000546211 NAB2Q15742 525 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 ZNF667Q5HYK9 610 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 LNX1Q8TBB1 728 aaPredicted RBP20.85■□□□□ 0.93
SKP2-208ENST00000546211 EPS8L1Q8TE68 723 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 FAXDC2Q96IV6 333 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 LACRTQ9GZZ8 138 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 MYO1AQ9UBC5 1043 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 DNAI1Q9UI46 699 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 TFR2Q9UP52 801 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 AGAP1Q9UPQ3 857 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 PJA2O43164 708 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 CYP11B1P15538 503 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 ACO1P21399 889 aaKnown RBP20.85■□□□□ 0.93
SKP2-208ENST00000546211 POLR2BP30876 1174 aaKnown RBP20.85■□□□□ 0.93
SKP2-208ENST00000546211 CDK7P50613 346 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 YWHAEP62258 255 aaKnown RBP20.85■□□□□ 0.93
SKP2-208ENST00000546211 SMYD5Q6GMV2 418 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 SLC47A2Q86VL8 602 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 SLC30A5Q8TAD4 765 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 CAGE1Q8TC20 777 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 U2AF1L4Q8WU68 220 aaKnown RBP20.85■□□□□ 0.93
SKP2-208ENST00000546211 SLC20A1Q8WUM9 679 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 RNF39Q9H2S5 420 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 TRIM10Q9UDY6 481 aa20.85■□□□□ 0.93
SKP2-208ENST00000546211 UBQLN1Q9UMX0 589 aaKnown RBP20.85■□□□□ 0.93
SKP2-208ENST00000546211 CITO14578 2027 aa20.84■□□□□ 0.93
SKP2-208ENST00000546211 CENPFP49454 3210 aa20.84■□□□□ 0.93
SKP2-208ENST00000546211 ABL1P00519 1130 aa20.84■□□□□ 0.93
SKP2-208ENST00000546211 P4HA1P13674 534 aa20.84■□□□□ 0.93
SKP2-208ENST00000546211 RAB27AP51159 221 aa20.84■□□□□ 0.93
SKP2-208ENST00000546211 XKR4Q5GH76 650 aa20.84■□□□□ 0.93
SKP2-208ENST00000546211 FBXO46Q6PJ61 603 aaPredicted RBP20.84■□□□□ 0.93
SKP2-208ENST00000546211 NOP9Q86U38 636 aaKnown RBP20.84■□□□□ 0.93
SKP2-208ENST00000546211 RPUSD2Q8IZ73 545 aaKnown RBP20.84■□□□□ 0.93
SKP2-208ENST00000546211 CXorf38Q8TB03 319 aa20.84■□□□□ 0.93
SKP2-208ENST00000546211 ZMAT2Q96NC0 199 aaKnown RBP20.84■□□□□ 0.93
SKP2-208ENST00000546211 VRTNQ9H8Y1 702 aa20.84■□□□□ 0.93
SKP2-208ENST00000546211 KLK14Q9P0G3 267 aa20.84■□□□□ 0.93
SKP2-208ENST00000546211 NXF1Q9UBU9 619 aaKnown RBP20.84■□□□□ 0.93
SKP2-208ENST00000546211 NOCTQ9UK39 431 aaKnown RBP20.84■□□□□ 0.93
SKP2-208ENST00000546211 NENFQ9UMX5 172 aa20.84■□□□□ 0.93
SKP2-208ENST00000546211 PAXBP1Q9Y5B6 917 aa20.84■□□□□ 0.93
SKP2-208ENST00000546211 ATP8B3O60423 1300 aa20.83■□□□□ 0.93
SKP2-208ENST00000546211 ITGA4P13612 1032 aa20.83■□□□□ 0.92
SKP2-208ENST00000546211 KCNE1P15382 129 aa20.83■□□□□ 0.92
SKP2-208ENST00000546211 GUCY2FP51841 1108 aa20.83■□□□□ 0.92
SKP2-208ENST00000546211 ZBTB6Q15916 424 aa20.83■□□□□ 0.92
SKP2-208ENST00000546211 WDR72Q3MJ13 1102 aa20.83■□□□□ 0.92
SKP2-208ENST00000546211 GLRA4Q5JXX5 417 aa20.83■□□□□ 0.92
SKP2-208ENST00000546211 ZNF569Q5MCW4 686 aa20.83■□□□□ 0.92
SKP2-208ENST00000546211 TMEM270Q6UE05 265 aa20.83■□□□□ 0.92
SKP2-208ENST00000546211 HPDLQ96IR7 371 aa20.83■□□□□ 0.92
SKP2-208ENST00000546211 IRX2Q9BZI1 471 aaPredicted RBP20.83■□□□□ 0.92
SKP2-208ENST00000546211 CXCL16Q9H2A7 254 aa20.83■□□□□ 0.92
SKP2-208ENST00000546211 CNTN6Q9UQ52 1028 aa20.83■□□□□ 0.92
SKP2-208ENST00000546211 SMIM28A0A1B0GU29 152 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 STAU1O95793 577 aaKnown RBP20.82■□□□□ 0.92
SKP2-208ENST00000546211 HSPA8P11142 646 aaKnown RBP20.82■□□□□ 0.92
SKP2-208ENST00000546211 CASQ1P31415 396 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 ASPAP45381 313 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 CDR2Q01850 454 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 MYO1EQ12965 1108 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 BFSP2Q13515 415 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 TAF3Q5VWG9 929 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 SCARA5Q6ZMJ2 495 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 ZNF677Q86XU0 584 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 FAM126BQ8IXS8 530 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 UBR7Q8N806 425 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 RBBP8NLQ8NC74 664 aaPredicted RBP20.82■□□□□ 0.92
SKP2-208ENST00000546211 OLIG1Q8TAK6 271 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 SECISBP2LQ93073 1101 aaKnown RBP20.82■□□□□ 0.92
SKP2-208ENST00000546211 TRAIPQ9BWF2 469 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 OSBPL7Q9BZF2 842 aa20.82■□□□□ 0.92
SKP2-208ENST00000546211 TLR3O15455 904 aaKnown RBP20.81■□□□□ 0.92
SKP2-208ENST00000546211 CD4P01730 458 aa20.81■□□□□ 0.92
SKP2-208ENST00000546211 TFRCP02786 760 aaKnown RBP20.81■□□□□ 0.92
SKP2-208ENST00000546211 H2AFZP0C0S5 128 aa20.81■□□□□ 0.92
SKP2-208ENST00000546211 DSC3Q14574 896 aa20.81■□□□□ 0.92
SKP2-208ENST00000546211 H2AFVQ71UI9 128 aa20.81■□□□□ 0.92
SKP2-208ENST00000546211 ACP6Q9NPH0 428 aa20.81■□□□□ 0.92
SKP2-208ENST00000546211 CISHQ9NSE2 258 aa20.81■□□□□ 0.92
SKP2-208ENST00000546211 TUBGCP4Q9UGJ1 667 aa20.81■□□□□ 0.92
SKP2-208ENST00000546211 INTUQ9ULD6 942 aa20.81■□□□□ 0.92
SKP2-208ENST00000546211 POLIQ9UNA4 740 aa20.81■□□□□ 0.92
SKP2-208ENST00000546211 DUSP10Q9Y6W6 482 aa20.81■□□□□ 0.92
SKP2-208ENST00000546211 MACROD2A1Z1Q3 448 aa20.8■□□□□ 0.92
SKP2-208ENST00000546211 SKIP12755 728 aa20.8■□□□□ 0.92
SKP2-208ENST00000546211 CD58P19256 250 aa20.8■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms