RNA–Protein interactions for RNA: ENST00000545889.5

CLIP1-218, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 5 BASIC

Gene CLIP1, Length 4,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-218ENST00000545889 ASNSD1Q9NWL6 643 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 CDC23Q9UJX2 597 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 EME2A4GXA9 379 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-218ENST00000545889 MYMKA6NI61 221 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 ZC3H11AO75152 810 aaKnown RBP eCLIP9.09□□□□□ -0.95
CLIP1-218ENST00000545889 CD4P01730 458 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 HOXA7P31268 230 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-218ENST00000545889 PAPOLAP51003 745 aaKnown RBP9.09□□□□□ -0.95
CLIP1-218ENST00000545889 ORC2Q13416 577 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-218ENST00000545889 SGO2Q562F6 1265 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 CATSPER3Q86XQ3 398 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 GSPT2Q8IYD1 628 aaKnown RBP9.09□□□□□ -0.95
CLIP1-218ENST00000545889 FAM133AQ8N9E0 248 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 UHMK1Q8TAS1 419 aaKnown RBP9.09□□□□□ -0.95
CLIP1-218ENST00000545889 YIPF2Q9BWQ6 316 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 SENP6Q9GZR1 1112 aaPredicted RBP9.09□□□□□ -0.95
CLIP1-218ENST00000545889 HAUS4Q9H6D7 363 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 XPNPEP3Q9NQH7 507 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 PXMP2Q9NR77 195 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 PCDHB8Q9UN66 801 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 IPPQ9Y573 584 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 PDE4DIPQ5VU43 2346 aa9.09□□□□□ -0.95
CLIP1-218ENST00000545889 hCG_2014768A0A024R1R8 64 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 SPDYE5A6NIY4 337 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 HMGB1P1B2RPK0 211 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-218ENST00000545889 EVI5O60447 810 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 MED24O75448 989 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 RPLP2P05387 115 aaKnown RBP9.08□□□□□ -0.96
CLIP1-218ENST00000545889 TCP1P17987 556 aaKnown RBP9.08□□□□□ -0.96
CLIP1-218ENST00000545889 CASP2P42575 452 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 LRRC63Q05C16 580 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 GTF2H3Q13889 308 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 SPOPLQ6IQ16 392 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 RGMBQ6NW40 437 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 NOTUMQ6P988 496 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 LRRC71Q8N4P6 559 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 SOCS4Q8WXH5 440 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 LY75O60449 1722 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 TMEM247A6NEH6 219 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 PAMP19021 973 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 DNAJB2P25686 324 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 HSD17B4P51659 736 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 COASYQ13057 564 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 UNC13DQ70J99 1090 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 C3orf20Q8ND61 904 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 DCUN1D1Q96GG9 259 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 UNC45AQ9H3U1 944 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 PRMT7Q9NVM4 692 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-218ENST00000545889 STK38LQ9Y2H1 464 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 USH1CQ9Y6N9 552 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 TTLL13PA6NNM8 815 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 PHF20L1A8MW92 1017 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 ADCY3O60266 1144 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 KPNA6O60684 536 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 PYGLP06737 847 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 TROVE2P10155 538 aaKnown RBP eCLIP9.08□□□□□ -0.96
CLIP1-218ENST00000545889 IRF1P10914 325 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 AP3M2P53677 418 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 STX1BP61266 288 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 ERVK-9P63128 1117 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 ERVK-24P63145 666 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 NOP14P78316 857 aaKnown RBP9.08□□□□□ -0.96
CLIP1-218ENST00000545889 BTNL9Q6UXG8 535 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 PASD1Q8IV76 773 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 ZCWPW1Q9H0M4 648 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 IGFLR1Q9H665 355 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 FAM50BQ9Y247 325 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 PTPN22Q9Y2R2 807 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 EPN1Q9Y6I3 576 aaPredicted RBP9.08□□□□□ -0.96
CLIP1-218ENST00000545889 PITPNM2Q9BZ72 1349 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 CACNA1SQ13698 1873 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 POC1B-GALNT4F8VUJ3 575 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 ZNF197O14709 1029 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 STRNO43815 780 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 DNAJC6O75061 913 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 PSMC1P62191 440 aaKnown RBP9.08□□□□□ -0.96
CLIP1-218ENST00000545889 TMEM132DQ14C87 1099 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 PGM5Q15124 567 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 FRA10AC1Q70Z53 315 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 HEY1Q9Y5J3 304 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 TAF1LQ8IZX4 1826 aa9.08□□□□□ -0.96
CLIP1-218ENST00000545889 MYO5AQ9Y4I1 1855 aaKnown RBP9.07□□□□□ -0.96
CLIP1-218ENST00000545889 NR3C1P04150 777 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 NMT1P30419 496 aaKnown RBP9.07□□□□□ -0.96
CLIP1-218ENST00000545889 IFNA8P32881 189 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 MMEL1Q495T6 779 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 BEND6Q5SZJ8 279 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-218ENST00000545889 CES5AQ6NT32 575 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 ARMC6Q6NXE6 501 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 MGARPQ8TDB4 240 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 ZNF483Q8TF39 744 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-218ENST00000545889 SNX19Q92543 992 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 ULK4Q96C45 1275 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 TRIM54Q9BYV2 358 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 SLC40A1Q9NP59 571 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 HACD3Q9P035 362 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 MCM8Q9UJA3 840 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 PTPRZ1P23471 2315 aaPredicted RBP9.07□□□□□ -0.96
CLIP1-218ENST00000545889 TBX3O15119 743 aa9.07□□□□□ -0.96
CLIP1-218ENST00000545889 MSCO60682 206 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms