RNA–Protein interactions for RNA: ENST00000545561.1

HPS5-210, Transcript of HPS5, biogenesis of lysosomal organelles complex 2 subunit 2, humanhuman

TSL 2

Gene HPS5, Length 1,121 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS5-210ENST00000545561 SIMC1Q8NDZ2 872 aa5.5□□□□□ -1.53
HPS5-210ENST00000545561 IFI44Q8TCB0 444 aa5.5□□□□□ -1.53
HPS5-210ENST00000545561 PTCD3Q96EY7 689 aaKnown RBP5.5□□□□□ -1.53
HPS5-210ENST00000545561 TMX3Q96JJ7 454 aa5.5□□□□□ -1.53
HPS5-210ENST00000545561 ALG13Q9NP73 1137 aaKnown RBP5.5□□□□□ -1.53
HPS5-210ENST00000545561 CASS4Q9NQ75 786 aa5.5□□□□□ -1.53
HPS5-210ENST00000545561 PTGFRNQ9P2B2 879 aa5.5□□□□□ -1.53
HPS5-210ENST00000545561 IPPQ9Y573 584 aa5.5□□□□□ -1.53
HPS5-210ENST00000545561 PCDHGA9Q9Y5G4 932 aaKnown RBP5.5□□□□□ -1.53
HPS5-210ENST00000545561 PCDHGA8Q9Y5G5 932 aa5.5□□□□□ -1.53
HPS5-210ENST00000545561 PCDHGA7Q9Y5G6 932 aa5.5□□□□□ -1.53
HPS5-210ENST00000545561 PCDHGA6Q9Y5G7 932 aa5.5□□□□□ -1.53
HPS5-210ENST00000545561 PCDHGA3Q9Y5H0 932 aa5.5□□□□□ -1.53
HPS5-210ENST00000545561 MRFAP1Q9Y605 127 aa5.5□□□□□ -1.53
HPS5-210ENST00000545561 CADPSQ9ULU8 1353 aa5.5□□□□□ -1.53
HPS5-210ENST00000545561 SALL3Q9BXA9 1300 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 GRM6O15303 877 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 HTRA2O43464 458 aaPredicted RBP5.49□□□□□ -1.53
HPS5-210ENST00000545561 XPOTO43592 962 aaKnown RBP5.49□□□□□ -1.53
HPS5-210ENST00000545561 IGSF3O75054 1194 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 MTHFD1P11586 935 aaKnown RBP5.49□□□□□ -1.53
HPS5-210ENST00000545561 FCER1AP12319 257 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 SLC6A4P31645 630 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 ITKQ08881 620 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 ZNF169Q14929 603 aaPredicted RBP5.49□□□□□ -1.53
HPS5-210ENST00000545561 ABCB5Q2M3G0 1257 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 PABPC1LQ4VXU2 614 aaKnown RBP5.49□□□□□ -1.53
HPS5-210ENST00000545561 LNX2Q8N448 690 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 Q8NA96 180 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 IL17RDQ8NFM7 739 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 CAGE1Q8TC20 777 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 RAB24Q969Q5 203 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 ZNF764Q96H86 408 aaPredicted RBP5.49□□□□□ -1.53
HPS5-210ENST00000545561 PRDM13Q9H4Q3 707 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 LIMCH1Q9UPQ0 1083 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 DMTF1Q9Y222 760 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 COX11Q9Y6N1 276 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 PCSK5Q92824 1860 aa5.49□□□□□ -1.53
HPS5-210ENST00000545561 POLR2AP24928 1970 aaKnown RBP5.48□□□□□ -1.53
HPS5-210ENST00000545561 SHTN1A0MZ66 631 aa5.48□□□□□ -1.53
HPS5-210ENST00000545561 FZD9O00144 591 aa5.48□□□□□ -1.53
HPS5-210ENST00000545561 GABRDO14764 452 aa5.48□□□□□ -1.53
HPS5-210ENST00000545561 ZFPL1O95159 310 aa5.48□□□□□ -1.53
HPS5-210ENST00000545561 EDNRBP24530 442 aa5.48□□□□□ -1.53
HPS5-210ENST00000545561 CDKN1CP49918 316 aaPredicted RBP5.48□□□□□ -1.53
HPS5-210ENST00000545561 AMPD3Q01432 767 aa5.48□□□□□ -1.53
HPS5-210ENST00000545561 GEN1Q17RS7 908 aa5.48□□□□□ -1.53
HPS5-210ENST00000545561 SP5Q6BEB4 398 aaPredicted RBP5.48□□□□□ -1.53
HPS5-210ENST00000545561 NTN5Q8WTR8 489 aaPredicted RBP5.48□□□□□ -1.53
HPS5-210ENST00000545561 MRGPRX4Q96LA9 322 aa5.48□□□□□ -1.53
HPS5-210ENST00000545561 AIFM2Q9BRQ8 373 aa5.48□□□□□ -1.53
HPS5-210ENST00000545561 CCDC8Q9H0W5 538 aaPredicted RBP5.48□□□□□ -1.53
HPS5-210ENST00000545561 R3HDMLQ9H3Y0 253 aa5.48□□□□□ -1.53
HPS5-210ENST00000545561 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.48□□□□□ -1.53
HPS5-210ENST00000545561 AGFG2O95081 481 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 SBK3P0C264 359 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 RARRES1P49788 294 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 ZNF280AP59817 542 aaPredicted RBP5.47□□□□□ -1.53
HPS5-210ENST00000545561 SIM1P81133 766 aaPredicted RBP5.47□□□□□ -1.53
HPS5-210ENST00000545561 IL10RAQ13651 578 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 RAB39AQ14964 217 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 PCBP2Q15366 365 aaKnown RBP eCLIP5.47□□□□□ -1.53
HPS5-210ENST00000545561 CCDC142Q17RM4 750 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 C3orf36Q3SXR2 165 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 UTP14CQ5TAP6 766 aaKnown RBP5.47□□□□□ -1.53
HPS5-210ENST00000545561 PPP4R3AQ6IN85 833 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 FBXO42Q6P3S6 717 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP5.47□□□□□ -1.53
HPS5-210ENST00000545561 RD3Q7Z3Z2 195 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 COA7Q96BR5 231 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 MTMR8Q96EF0 704 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 TEKT5Q96M29 485 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 KCTD5Q9NXV2 234 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 JKAMPQ9P055 326 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 CALCOCO1Q9P1Z2 691 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 LRIT1Q9P2V4 623 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 TLK1Q9UKI8 766 aa5.47□□□□□ -1.53
HPS5-210ENST00000545561 TRGV11A0A075B6L2 103 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 A0A1W2PS29 197 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 CCDC154A6NI56 674 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 ALG1L2C9J202 215 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 SLC43A1O75387 559 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 KATNA1O75449 491 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 RPLP2P05387 115 aaKnown RBP5.46□□□□□ -1.54
HPS5-210ENST00000545561 ELLP55199 621 aaPredicted RBP5.46□□□□□ -1.54
HPS5-210ENST00000545561 MRPS35P82673 323 aaKnown RBP5.46□□□□□ -1.54
HPS5-210ENST00000545561 KIF23Q02241 960 aaPredicted RBP5.46□□□□□ -1.54
HPS5-210ENST00000545561 SYCE2Q6PIF2 218 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 PRPF38AQ8NAV1 312 aaKnown RBP5.46□□□□□ -1.54
HPS5-210ENST00000545561 FAM98AQ8NCA5 519 aaKnown RBP5.46□□□□□ -1.54
HPS5-210ENST00000545561 SSH3Q8TE77 659 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 NELL1Q92832 810 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 VOPP1Q96AW1 172 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 CLPTM1LQ96KA5 538 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 DUSP26Q9BV47 211 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 TLR10Q9BXR5 811 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 FOXJ2Q9P0K8 574 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 NEU2Q9Y3R4 380 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 PCDHB1Q9Y5F3 818 aa5.46□□□□□ -1.54
HPS5-210ENST00000545561 COL11A2P13942 1736 aaPredicted RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms