RNA–Protein interactions for RNA: ENST00000544738.5

DDX55-212, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 956 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-212ENST00000544738 H0YCG3 227 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 TMEM189-UBE2V1I3L0A0 370 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 SLC16A4O15374 487 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 TRAPPC3O43617 180 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 PLA2G4BP0C869 781 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 MCF2P10911 925 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 PLS3P13797 630 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 PDCP20941 246 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 UBA7P41226 1012 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 ADCY1Q08828 1119 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 FZD5Q13467 585 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 RTP2Q5QGT7 225 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 PPM1LQ5SGD2 360 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 LIN9Q5TKA1 542 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 PRSS55Q6UWB4 352 aaPredicted RBP17.73■□□□□ 0.43
DDX55-212ENST00000544738 TAS1R3Q7RTX0 852 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 CEP57Q86XR8 500 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 HASPINQ8TF76 798 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 CALML4Q96GE6 196 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 PLIN2Q99541 437 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 TARS2Q9BW92 718 aaKnown RBP17.73■□□□□ 0.43
DDX55-212ENST00000544738 CDT1Q9H211 546 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 CXCL16Q9H2A7 254 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 HEBP1Q9NRV9 189 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 SLC38A7Q9NVC3 462 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 LARSQ9P2J5 1176 aaKnown RBP17.73■□□□□ 0.43
DDX55-212ENST00000544738 CACNG4Q9UBN1 327 aa17.73■□□□□ 0.43
DDX55-212ENST00000544738 NDRG2Q9UN36 371 aaKnown RBP17.73■□□□□ 0.43
DDX55-212ENST00000544738 MYH15Q9Y2K3 1946 aa17.72■□□□□ 0.43
DDX55-212ENST00000544738 SMIM28A0A1B0GU29 152 aa17.72■□□□□ 0.43
DDX55-212ENST00000544738 B3GAT3O94766 335 aa17.72■□□□□ 0.43
DDX55-212ENST00000544738 PROZP22891 400 aa17.72■□□□□ 0.43
DDX55-212ENST00000544738 SLC12A3P55017 1021 aa17.72■□□□□ 0.43
DDX55-212ENST00000544738 RAD51AP2Q09MP3 1159 aa17.72■□□□□ 0.43
DDX55-212ENST00000544738 CUL4AQ13619 759 aa17.72■□□□□ 0.43
DDX55-212ENST00000544738 PSMD5Q16401 504 aa17.72■□□□□ 0.43
DDX55-212ENST00000544738 TMEM119Q4V9L6 283 aa17.72■□□□□ 0.43
DDX55-212ENST00000544738 N4BP2L1Q5TBK1 243 aaPredicted RBP17.72■□□□□ 0.43
DDX55-212ENST00000544738 MPZL3Q6UWV2 235 aa17.72■□□□□ 0.43
DDX55-212ENST00000544738 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.72■□□□□ 0.43
DDX55-212ENST00000544738 PRR23CQ6ZRP0 262 aa17.72■□□□□ 0.43
DDX55-212ENST00000544738 LNX1Q8TBB1 728 aaPredicted RBP17.72■□□□□ 0.43
DDX55-212ENST00000544738 DDX27Q96GQ7 796 aaKnown RBP17.72■□□□□ 0.43
DDX55-212ENST00000544738 ACAP3Q96P50 834 aa17.72■□□□□ 0.43
DDX55-212ENST00000544738 FASNP49327 2511 aaKnown RBP17.71■□□□□ 0.43
DDX55-212ENST00000544738 LRP3O75074 770 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 XYLBO75191 536 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 TOM1L1O75674 476 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 C8AP07357 584 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 HNRNPA1P09651 372 aaKnown RBP eCLIP17.71■□□□□ 0.43
DDX55-212ENST00000544738 SCP2P22307 547 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 LONP1P36776 959 aaKnown RBP17.71■□□□□ 0.43
DDX55-212ENST00000544738 PPP2R5DQ14738 602 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 XKR4Q5GH76 650 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 GLRA4Q5JXX5 417 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 IL31Q6EBC2 164 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 ALKAL1Q6UXT8 129 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 TMEM161BQ8NDZ6 487 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 ING5Q8WYH8 240 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 DDX1Q92499 740 aaKnown RBP17.71■□□□□ 0.43
DDX55-212ENST00000544738 CLSTN3Q9BQT9 956 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 PLA2G2FQ9BZM2 168 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 ODF2LQ9ULJ1 636 aa17.71■□□□□ 0.43
DDX55-212ENST00000544738 MTCL1Q9Y4B5 1905 aaKnown RBP17.7■□□□□ 0.42
DDX55-212ENST00000544738 PATJQ8NI35 1801 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 F5P12259 2224 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 MAPTP10636 758 aaKnown RBP17.7■□□□□ 0.42
DDX55-212ENST00000544738 FGFR3P22607 806 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 CLCNKBP51801 687 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 OSTNP61366 133 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 SIM2Q14190 667 aaPredicted RBP17.7■□□□□ 0.42
DDX55-212ENST00000544738 CSRP2Q16527 193 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 UPP1Q16831 310 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 ZPBP2Q6X784 338 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 CEP120Q8N960 986 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 MCRS1Q96EZ8 462 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 HCFC1R1Q9NWW0 138 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 FBXW11Q9UKB1 542 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 ZZEF1O43149 2961 aa17.7■□□□□ 0.42
DDX55-212ENST00000544738 ZFYVE26Q68DK2 2539 aa17.69■□□□□ 0.42
DDX55-212ENST00000544738 ASPMQ8IZT6 3477 aa17.69■□□□□ 0.42
DDX55-212ENST00000544738 VPS37CA5D8V6 355 aaPredicted RBP17.69■□□□□ 0.42
DDX55-212ENST00000544738 ABLIM1O14639 778 aa17.69■□□□□ 0.42
DDX55-212ENST00000544738 TDGF1P13385 188 aa17.69■□□□□ 0.42
DDX55-212ENST00000544738 HOXB3P14651 431 aaPredicted RBP17.69■□□□□ 0.42
DDX55-212ENST00000544738 KCNE1P15382 129 aa17.69■□□□□ 0.42
DDX55-212ENST00000544738 NOLC1Q14978 699 aaKnown RBP eCLIP17.69■□□□□ 0.42
DDX55-212ENST00000544738 SF3A1Q15459 793 aaKnown RBP17.69■□□□□ 0.42
DDX55-212ENST00000544738 ARSHQ5FYA8 562 aa17.69■□□□□ 0.42
DDX55-212ENST00000544738 NPAS3Q8IXF0 933 aa17.69■□□□□ 0.42
DDX55-212ENST00000544738 RASSF8Q8NHQ8 419 aa17.69■□□□□ 0.42
DDX55-212ENST00000544738 CNTN3Q9P232 1028 aa17.69■□□□□ 0.42
DDX55-212ENST00000544738 CLDN3O15551 220 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 PMLP29590 882 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 RPL9P32969 192 aaKnown RBP17.68■□□□□ 0.42
DDX55-212ENST00000544738 NCKAP1LP55160 1127 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 PABPC1LQ4VXU2 614 aaKnown RBP17.68■□□□□ 0.42
DDX55-212ENST00000544738 ANKS3Q6ZW76 656 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 RTL10Q7L3V2 364 aa17.68■□□□□ 0.42
DDX55-212ENST00000544738 HAUS6Q7Z4H7 955 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms