RNA–Protein interactions for RNA: ENST00000543941.1

C1RL-209, Transcript of complement C1r subcomponent like, humanhuman

TSL 3

Gene C1RL, Length 539 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1RL-209ENST00000543941 ZSCAN16Q9H4T2 348 aaPredicted RBP12.42□□□□□ -0.42
C1RL-209ENST00000543941 TBC1D17Q9HA65 648 aa12.42□□□□□ -0.42
C1RL-209ENST00000543941 SLC2A4RGQ9NR83 387 aa12.42□□□□□ -0.42
C1RL-209ENST00000543941 TOPORSQ9NS56 1045 aaPredicted RBP12.42□□□□□ -0.42
C1RL-209ENST00000543941 FBXL21Q9UKT6 434 aa12.42□□□□□ -0.42
C1RL-209ENST00000543941 MTF2Q9Y483 593 aaPredicted RBP12.42□□□□□ -0.42
C1RL-209ENST00000543941 MORC2Q9Y6X9 1032 aaPredicted RBP12.42□□□□□ -0.42
C1RL-209ENST00000543941 MYO15AQ9UKN7 3530 aa12.42□□□□□ -0.42
C1RL-209ENST00000543941 FANCMQ8IYD8 2048 aa12.42□□□□□ -0.42
C1RL-209ENST00000543941 ZFHX2Q9C0A1 2572 aaPredicted RBP12.41□□□□□ -0.42
C1RL-209ENST00000543941 SPTLC1O15269 473 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 GFRA3O60609 400 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 PIGRP01833 764 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 DCNP07585 359 aaKnown RBP12.41□□□□□ -0.42
C1RL-209ENST00000543941 RHOP08100 348 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 OR4Q2P0C623 313 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 ZSCAN22P10073 491 aaPredicted RBP12.41□□□□□ -0.42
C1RL-209ENST00000543941 FCARP24071 287 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 LRPAP1P30533 357 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 RPL9P32969 192 aaKnown RBP12.41□□□□□ -0.42
C1RL-209ENST00000543941 AARSP49588 968 aaKnown RBP eCLIP12.41□□□□□ -0.42
C1RL-209ENST00000543941 ARPP19P56211 112 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 LIN9Q5TKA1 542 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 RNF19BQ6ZMZ0 732 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 FRMD5Q7Z6J6 570 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 SPRYD3Q8NCJ5 442 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 NXPE3Q969Y0 559 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 MCRS1Q96EZ8 462 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 ZSWIM3Q96MP5 696 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 TMEM209Q96SK2 561 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 CEP72Q9P209 647 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 FBXO2Q9UK22 296 aaPredicted RBP12.41□□□□□ -0.42
C1RL-209ENST00000543941 TBX20Q9UMR3 447 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 ZDHHC9Q9Y397 364 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 MIA3Q5JRA6 1907 aa12.41□□□□□ -0.42
C1RL-209ENST00000543941 VPS13AQ96RL7 3174 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 DMDP11532 3685 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 PATJQ8NI35 1801 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 A0A087X0B3 334 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 A0A0B4J269 797 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 PRR23AA6NEV1 266 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 M0QZQ0 153 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 SYN3O14994 580 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 CLDN3O15551 220 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 F13A1P00488 732 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 ATF2P15336 505 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 GJA1P17302 382 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 CD72P21854 359 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 MARCKSP29966 332 aaPredicted RBP12.4□□□□□ -0.42
C1RL-209ENST00000543941 CDR1P51861 262 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 GTF2BQ00403 316 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 KCNA1Q09470 495 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 STRN3Q13033 797 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 SNW1Q13573 536 aaKnown RBP12.4□□□□□ -0.42
C1RL-209ENST00000543941 ANGPT1Q15389 498 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 PABPC1LQ4VXU2 614 aaKnown RBP12.4□□□□□ -0.42
C1RL-209ENST00000543941 TANGO2Q6ICL3 276 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 PDXDC1Q6P996 788 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 CRELD2Q6UXH1 353 aaPredicted RBP12.4□□□□□ -0.42
C1RL-209ENST00000543941 TCEAL8Q8IYN2 117 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 MAML2Q8IZL2 1156 aaPredicted RBP12.4□□□□□ -0.42
C1RL-209ENST00000543941 KCTD17Q8N5Z5 321 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 FAM84AQ96KN4 292 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 AK8Q96MA6 479 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 STRA6Q9BX79 667 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 LRRC3Q9BY71 257 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 FGFBP2Q9BYJ0 223 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 CCSER1Q9C0I3 900 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 SLC38A7Q9NVC3 462 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 KCND2Q9NZV8 630 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 CPSF3Q9UKF6 684 aaKnown RBP12.4□□□□□ -0.42
C1RL-209ENST00000543941 ODF2LQ9ULJ1 636 aa12.4□□□□□ -0.42
C1RL-209ENST00000543941 TRAPPC3O43617 180 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 TRAK2O60296 914 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 BMP15O95972 392 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 NFICP08651 508 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 CLTAP09496 248 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 MCM4P33991 863 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 UBA7P41226 1012 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 SMTNP53814 917 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 STARD6P59095 220 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 FZD5Q13467 585 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 CTXN3Q4LDR2 81 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 PHLDB3Q6NSJ2 640 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 ELMSAN1Q6PJG2 1045 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 MYCT1Q8N699 235 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 TTC9BQ8N6N2 239 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 BEST2Q8NFU1 509 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 DNAJC19Q96DA6 116 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 KIF12Q96FN5 646 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 CDK5RAP3Q96JB5 506 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 RTP3Q9BQQ7 232 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 DDX23Q9BUQ8 820 aaKnown RBP12.39□□□□□ -0.43
C1RL-209ENST00000543941 DNAJC25Q9H1X3 360 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 CYP4F11Q9HBI6 524 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 AVENQ9NQS1 362 aaPredicted RBP12.39□□□□□ -0.43
C1RL-209ENST00000543941 ARHGEF3Q9NR81 526 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 LARSQ9P2J5 1176 aaKnown RBP12.39□□□□□ -0.43
C1RL-209ENST00000543941 PCDHB8Q9UN66 801 aa12.39□□□□□ -0.43
C1RL-209ENST00000543941 INSL5Q9Y5Q6 135 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms