RNA–Protein interactions for RNA: ENST00000543768.1

SCNN1A-221, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SCNN1A, Length 2,361 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-221ENST00000543768 SHBGP04278 402 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 SSTR3P32745 418 aaPredicted RBP17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 KRT71Q3SY84 523 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 ARFGAP2Q8N6H7 521 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 RBBP8NLQ8NC74 664 aaPredicted RBP17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 C11orf70Q9BRQ4 267 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 EPN3Q9H201 632 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 ELP3Q9H9T3 547 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 PARP2Q9UGN5 583 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 NOVA2Q9UNW9 492 aaKnown RBP17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 SRCAPQ6ZRS2 3230 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 DCDC2CA8MYV0 355 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 ZBTB42B2RXF5 422 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 PTP4A2Q12974 167 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 HSDL1Q3SXM5 330 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 DAB2IPQ5VWQ8 1189 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 IER5Q5VY09 327 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 UBR7Q8N806 425 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 C1orf54Q8WWF1 131 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 SLCO2A1Q92959 643 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 ART4Q93070 314 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 VCPIP1Q96JH7 1222 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 ADAM22Q9P0K1 906 aa17.15■□□□□ 0.34
SCNN1A-221ENST00000543768 TOM1L1O75674 476 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 PROSCO94903 275 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 MARK3P27448 753 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 EFNA5P52803 228 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 MAMLD1Q13495 774 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 PTGISQ16647 500 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 SGO2Q562F6 1265 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 CDCA2Q69YH5 1023 aaPredicted RBP17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 PHF13Q86YI8 300 aaPredicted RBP17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 OTUD5Q96G74 571 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 FAM167AQ96KS9 214 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 GPR20Q99678 358 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 ACO2Q99798 780 aaKnown RBP17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 MRPL4Q9BYD3 311 aaKnown RBP17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 AZI2Q9H6S1 392 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 ADARB2Q9NS39 739 aaKnown RBP17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 PPME1Q9Y570 386 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 ECEL1O95672 775 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 ASS1P00966 412 aaKnown RBP17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 PGK2P07205 417 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 ZNF132P52740 706 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 IFFO1Q0D2I5 559 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 LAMTOR4Q0VGL1 99 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 LIN9Q5TKA1 542 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 PLEKHA7Q6IQ23 1121 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 ZBTB33Q86T24 672 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 TRIM50Q86XT4 487 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 DCPSQ96C86 337 aaKnown RBP17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 CLMNQ96JQ2 1002 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 SEMA4AQ9H3S1 761 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 TXNRD2Q9NNW7 524 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 CHST7Q9NS84 486 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 PASKQ96RG2 1323 aa17.14■□□□□ 0.33
SCNN1A-221ENST00000543768 IGKV6-21A0A0C4DH24 114 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 O00370 1275 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 EBAG9O00559 213 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 NDUFAB1O14561 156 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 ABLIM1O14639 778 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 TP73O15350 636 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 THAP12O43422 761 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 LGR5O75473 907 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 SRGAP2CP0DJJ0 459 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 MAGOHP61326 146 aaKnown RBP17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 PPP2R2AP63151 447 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 GRM1Q13255 1194 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 UBAP2Q5T6F2 1119 aaKnown RBP17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 WDR49Q8IV35 697 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 SULF1Q8IWU6 871 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 ZNF606Q8WXB4 792 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 TLCD1Q96CP7 247 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 MTRF1LQ9UGC7 380 aaKnown RBP17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 MCM3APO60318 1980 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 CAND2O75155 1236 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 AP3M2P53677 418 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 SLC29A2Q14542 456 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 Q3C1V9 767 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 CELF3Q5SZQ8 465 aaKnown RBP17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 MMS22LQ6ZRQ5 1243 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 LRRC71Q8N4P6 559 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 RNF149Q8NC42 400 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 TCHPQ9BT92 498 aa17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.13■□□□□ 0.33
SCNN1A-221ENST00000543768 SRRM3A6NNA2 597 aaPredicted RBP17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 ANKRD65E5RJM6 399 aa17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 SLC25A27O95847 323 aa17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 CPP00450 1065 aa17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 IREB2P48200 963 aaKnown RBP17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 SEC24CP53992 1094 aa17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 TAS2R40P59535 323 aa17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 SNX1Q13596 522 aa17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 ODF2Q5BJF6 829 aa17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 DENND2CQ68D51 928 aa17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 ERO1BQ86YB8 467 aa17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 NCAPGQ9BPX3 1015 aa17.12■□□□□ 0.33
SCNN1A-221ENST00000543768 MTMR12Q9C0I1 747 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms