RNA–Protein interactions for RNA: ENST00000543449.1

NPIPB4-217, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 685 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-217ENST00000543449 CGNQ9P2M7 1197 aaKnown RBP11.16□□□□□ -0.62
NPIPB4-217ENST00000543449 CACNG4Q9UBN1 327 aa11.16□□□□□ -0.62
NPIPB4-217ENST00000543449 DSEQ9UL01 958 aa11.16□□□□□ -0.62
NPIPB4-217ENST00000543449 PCDHA7Q9UN72 937 aa11.16□□□□□ -0.62
NPIPB4-217ENST00000543449 SORCS3Q9UPU3 1222 aa11.16□□□□□ -0.62
NPIPB4-217ENST00000543449 CITO14578 2027 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 A0A087X0B3 334 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 OR6C75A6NL08 312 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 C2CD4DB7Z1M9 353 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 M0QZQ0 153 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 POLR2DO15514 142 aaKnown RBP11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 C8AP07357 584 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 RPL17P18621 184 aaKnown RBP11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 TYMPP19971 482 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 OR1D2P34982 312 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 TNFSF9P41273 254 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 BRCC3P46736 316 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 AARSP49588 968 aaKnown RBP eCLIP11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 YWHAHQ04917 246 aaPredicted RBP11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 MRPL58Q14197 206 aaKnown RBP11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 SURF1Q15526 300 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 CTXN3Q4LDR2 81 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 SEZ6Q53EL9 994 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 ARMCX5Q6P1M9 558 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 SLC39A4Q6P5W5 647 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 CD300LGQ6UXG3 332 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 DSTYKQ6XUX3 929 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 UNC13DQ70J99 1090 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 SPRYD3Q8NCJ5 442 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 C3orf58Q8NDZ4 430 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 CCDC47Q96A33 483 aaKnown RBP11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 ZNF560Q96MR9 790 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 HAPLN2Q9GZV7 340 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 KCNH3Q9ULD8 1083 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 R3HCC1Q9Y3T6 440 aaKnown RBP11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 CDY1Q9Y6F8 540 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 UNC80Q8N2C7 3258 aa11.15□□□□□ -0.62
NPIPB4-217ENST00000543449 MYH15Q9Y2K3 1946 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 ANKRD63C9JTQ0 380 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 EXTL3O43909 919 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 OAZ2O95190 189 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 KIF20AO95235 890 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 LRG1P02750 347 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 SLFN14P0C7P3 912 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 ODC1P11926 461 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 ATF2P15336 505 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 COL9A1P20849 921 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 CMA1P23946 247 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 ACOT2P49753 483 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 NUCB2P80303 420 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 PLD1Q13393 1074 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 FOXD4L6Q3SYB3 417 aaPredicted RBP11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 FAM26FQ5R3K3 315 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 JADE1Q6IE81 842 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 FOXD4L3Q6VB84 417 aaPredicted RBP11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 TRIM67Q6ZTA4 783 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 HS2ST1Q7LGA3 356 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 METTL23Q86XA0 190 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 BRSK2Q8IWQ3 736 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 ELMOD1Q8N336 334 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 KHSRPQ92945 711 aaKnown RBP eCLIP11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 PRRX2Q99811 253 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 TBC1D7Q9P0N9 293 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 EPS15L1Q9UBC2 864 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 TUBGCP4Q9UGJ1 667 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 AFF4Q9UHB7 1163 aaKnown RBP11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 PRUNE2Q8WUY3 3088 aa11.14□□□□□ -0.63
NPIPB4-217ENST00000543449 EYSQ5T1H1 3165 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 PRRG1O14668 218 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 MEFVO15553 781 aaPredicted RBP11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 TBC1D4O60343 1298 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 RFPL2O75678 378 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 ABLIM3O94929 683 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 WEE2P0C1S8 567 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 SPATA31D3P0C874 917 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 MYBP10242 640 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 GBP2P32456 591 aaPredicted RBP11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 TAF6P49848 677 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 ROR1Q01973 937 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 SMARCB1Q12824 385 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 PSMD2Q13200 908 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 MYBPC2Q14324 1141 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 SV2CQ496J9 727 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 C9orf57Q5W0N0 161 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 SPATA31D4Q6ZUB0 917 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 SUGP1Q8IWZ8 645 aaKnown RBP11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 TCEAL8Q8IYN2 117 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 GPD1LQ8N335 351 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 LEMD2Q8NC56 503 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 GOLGA5Q8TBA6 731 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 SLC7A14Q8TBB6 771 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 ZNF507Q8TCN5 953 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 LEO1Q8WVC0 666 aaPredicted RBP11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 ZNF707Q96C28 371 aaPredicted RBP11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 FAM213AQ9BRX8 229 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 AVENQ9NQS1 362 aaPredicted RBP11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 DPP3Q9NY33 737 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 RBAKQ9NYW8 714 aaPredicted RBP11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 HSFX1Q9UBD0 423 aa11.13□□□□□ -0.63
NPIPB4-217ENST00000543449 LIMD1Q9UGP4 676 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms