RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 HELQQ8TDG4 1101 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 BAP1Q92560 729 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 TATDN2Q93075 761 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 ELMO3Q96BJ8 720 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 VWCEQ96DN2 955 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 TRIM44Q96DX7 344 aaPredicted RBP11.48□□□□□ -0.57
DDB1-221ENST00000543162 HPDLQ96IR7 371 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 FAM81BQ96LP2 452 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 PANX2Q96RD6 677 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 DNAJC7Q99615 494 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 NAA15Q9BXJ9 866 aaKnown RBP11.48□□□□□ -0.57
DDB1-221ENST00000543162 STK33Q9BYT3 514 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 XYLT2Q9H1B5 865 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 IL23AQ9NPF7 189 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 ABHD10Q9NUJ1 306 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 ZNHIT6Q9NWK9 470 aaKnown RBP11.48□□□□□ -0.57
DDB1-221ENST00000543162 AJAP1Q9UKB5 411 aaPredicted RBP11.48□□□□□ -0.57
DDB1-221ENST00000543162 MYO6Q9UM54 1294 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 PLAGL2Q9UPG8 496 aa11.48□□□□□ -0.57
DDB1-221ENST00000543162 MICAL3Q7RTP6 2002 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 LRRC53A6NM62 1247 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 INPPL1O15357 1258 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 HOXA2O43364 376 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 NRDCO43847 1150 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 EFCAB14O75071 495 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 POMCP01189 267 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 FGFR1P11362 822 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 TBXAS1P24557 533 aaPredicted RBP11.47□□□□□ -0.57
DDB1-221ENST00000543162 AFF1P51825 1210 aaKnown RBP11.47□□□□□ -0.57
DDB1-221ENST00000543162 GCNT1Q02742 428 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 FPGSQ05932 587 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 SOX4Q06945 474 aaPredicted RBP11.47□□□□□ -0.57
DDB1-221ENST00000543162 GRIK3Q13003 919 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 DRAP1Q14919 205 aaPredicted RBP11.47□□□□□ -0.57
DDB1-221ENST00000543162 ARHGAP44Q17R89 818 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 ZNF667Q5HYK9 610 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 NOMO2Q5JPE7 1267 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 CLLU1OSQ5K130 101 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 SFMBT2Q5VUG0 894 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 C9orf57Q5W0N0 161 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 ENOSF1Q7L5Y1 443 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 LRRC8AQ8IWT6 810 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 LRRC52Q8N7C0 313 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 BADQ92934 168 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 NIF3L1Q9GZT8 377 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 GOLGA2P5Q9HBQ8 144 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 APOBEC3GQ9HC16 384 aaKnown RBP11.47□□□□□ -0.57
DDB1-221ENST00000543162 MIOSQ9NXC5 875 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 KANSL3Q9P2N6 904 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 NUB1Q9Y5A7 615 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 TTC3P53804 2025 aa11.47□□□□□ -0.57
DDB1-221ENST00000543162 ANO9A1A5B4 782 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 F8VZ95 297 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 PIRO00625 290 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 STAU1O95793 577 aaKnown RBP11.46□□□□□ -0.57
DDB1-221ENST00000543162 AMHP03971 560 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 ACRP10323 421 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 P4HA1P13674 534 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 LRPAP1P30533 357 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 RPL9P32969 192 aaKnown RBP11.46□□□□□ -0.57
DDB1-221ENST00000543162 PNPLA4P41247 253 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 STAT1P42224 750 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 JAM2P57087 298 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 TUSC3Q13454 348 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 CUL2Q13617 745 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 NAB2Q15742 525 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 ASIC2Q16515 512 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 WDR72Q3MJ13 1102 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.46□□□□□ -0.57
DDB1-221ENST00000543162 FMNL3Q8IVF7 1028 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 CCDC112Q8NEF3 446 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 SYN2Q92777 582 aaPredicted RBP11.46□□□□□ -0.57
DDB1-221ENST00000543162 DPF3Q92784 378 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 KAT5Q92993 513 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 FAXDC2Q96IV6 333 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 ZNF560Q96MR9 790 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 KREMEN1Q96MU8 473 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 BAG1Q99933 345 aaPredicted RBP11.46□□□□□ -0.57
DDB1-221ENST00000543162 VRTNQ9H8Y1 702 aa11.46□□□□□ -0.57
DDB1-221ENST00000543162 NXF1Q9UBU9 619 aaKnown RBP11.46□□□□□ -0.57
DDB1-221ENST00000543162 TDRD15B5MCY1 1934 aaKnown RBP11.45□□□□□ -0.58
DDB1-221ENST00000543162 LTBP2Q14767 1821 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 CASTOR2A6NHX0 329 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 FOXN3O00409 490 aaPredicted RBP11.45□□□□□ -0.58
DDB1-221ENST00000543162 PPEF2O14830 753 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 BAIAP3O94812 1187 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 UPP2O95045 317 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 SYN1P17600 705 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 HNRNPH3P31942 346 aaKnown RBP11.45□□□□□ -0.58
DDB1-221ENST00000543162 SOX5P35711 763 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 USP8P40818 1118 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 TNNC1P63316 161 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 ARID5AQ03989 594 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 RNASELQ05823 741 aaKnown RBP11.45□□□□□ -0.58
DDB1-221ENST00000543162 HS1BP3Q53T59 392 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 TNS4Q8IZW8 715 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 CRIPAKQ8N1N5 446 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 RSPH1Q8WYR4 309 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 SHC3Q92529 594 aa11.45□□□□□ -0.58
DDB1-221ENST00000543162 JAKMIP2Q96AA8 810 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms