RNA–Protein interactions for RNA: ENST00000543140.5

COL4A1-204, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A1, Length 2,547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-204ENST00000543140 SEC14L1Q92503 715 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 RAB17Q9H0T7 212 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 CPSF3Q9UKF6 684 aaKnown RBP17.42■□□□□ 0.38
COL4A1-204ENST00000543140 PPME1Q9Y570 386 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 HBP1O60381 514 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 GJB6O95452 261 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 ASS1P00966 412 aaKnown RBP17.42■□□□□ 0.38
COL4A1-204ENST00000543140 CTNNA2P26232 953 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 ADORA2AP29274 412 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 NOMO3P69849 1222 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 CLUL1Q15846 466 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 UAP1Q16222 522 aaPredicted RBP17.42■□□□□ 0.38
COL4A1-204ENST00000543140 DUOXA2Q1HG44 320 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 MMS22LQ6ZRQ5 1243 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 TMEM192Q8IY95 271 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 TMEM130Q8N3G9 435 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 ERP44Q9BS26 406 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 C2orf40Q9H1Z8 148 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 FAM114A2Q9NRY5 505 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 ADAM22Q9P0K1 906 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 SNX24Q9Y343 169 aa17.42■□□□□ 0.38
COL4A1-204ENST00000543140 PLXNA1Q9UIW2 1896 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 MYO1FO00160 1098 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 PDHXO00330 501 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 WEE2P0C1S8 567 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 INSRRP14616 1297 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 ARHGAP1Q07960 439 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 PPP2R5EQ16537 467 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 MAP1SQ66K74 1059 aaPredicted RBP17.41■□□□□ 0.38
COL4A1-204ENST00000543140 MPZL3Q6UWV2 235 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 SCARA5Q6ZMJ2 495 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 EXOC8Q8IYI6 725 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 UBLCP1Q8WVY7 318 aaPredicted RBP17.41■□□□□ 0.38
COL4A1-204ENST00000543140 ERAP1Q9NZ08 941 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 PTPN22Q9Y2R2 807 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 ACKR2O00590 384 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 ZNF286BP0CG31 522 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 RARAP10276 462 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 KCNJ1P48048 391 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 SLC26A2P50443 739 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 HNRNPH2P55795 449 aaKnown RBP17.41■□□□□ 0.38
COL4A1-204ENST00000543140 DHX9Q08211 1270 aaKnown RBP17.41■□□□□ 0.38
COL4A1-204ENST00000543140 TRPC3Q13507 836 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 TFDP1Q14186 410 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 CEP85LQ5SZL2 805 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 DUPD1Q68J44 220 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 CCDC137Q6PK04 289 aaKnown RBP17.41■□□□□ 0.38
COL4A1-204ENST00000543140 TSHZ1Q6ZSZ6 1077 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 ZNF606Q8WXB4 792 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 CENPHQ9H3R5 247 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 AVENQ9NQS1 362 aaPredicted RBP17.41■□□□□ 0.38
COL4A1-204ENST00000543140 PNMA3Q9UL41 463 aa17.41■□□□□ 0.38
COL4A1-204ENST00000543140 ECM2O94769 699 aaPredicted RBP17.4■□□□□ 0.38
COL4A1-204ENST00000543140 HOXC6P09630 235 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 MYBL1P10243 752 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 CHRNA3P32297 505 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 ACTN2P35609 894 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 DHX34Q14147 1143 aaKnown RBP17.4■□□□□ 0.38
COL4A1-204ENST00000543140 ZSCAN26Q16670 478 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 TTC19Q6DKK2 380 aaPredicted RBP17.4■□□□□ 0.38
COL4A1-204ENST00000543140 TAPT1Q6NXT6 567 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 EFCAB13Q8IY85 973 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 SHCBP1Q8NEM2 672 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 LRRC45Q96CN5 670 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 TRIM11Q96F44 468 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 JPH2Q9BR39 696 aaPredicted RBP17.4■□□□□ 0.38
COL4A1-204ENST00000543140 FZD8Q9H461 694 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 CNTN6Q9UQ52 1028 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 GLTPD2A6NH11 291 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 O00370 1275 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 C22orf31O95567 290 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 LGALS2P05162 132 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 TMEM191BP0C7N4 346 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 HSPA6P17066 643 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 PTGIRP43119 386 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 PLTPP55058 493 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 MBTD1Q05BQ5 628 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 LEKR1Q6ZMV7 388 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 CCDC105Q8IYK2 499 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 AFG1LQ8WV93 481 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 PTPRHQ9HD43 1115 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 MTUS1Q9ULD2 1270 aa17.4■□□□□ 0.38
COL4A1-204ENST00000543140 CXCL8P10145 99 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 PROZP22891 400 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 BRD2P25440 801 aaKnown RBP17.39■□□□□ 0.37
COL4A1-204ENST00000543140 ADCYAP1R1P41586 468 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 AP3M2P53677 418 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 MAMLD1Q13495 774 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 LIN9Q5TKA1 542 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 TMC3Q7Z5M5 1100 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 FMO2Q99518 471 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 CISHQ9NSE2 258 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 ANK1P16157 1881 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 FAM187AA6NFU0 413 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 BTBD19C9JJ37 291 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 KRT19P08727 400 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 CCNA1P78396 465 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 SIX1Q15475 284 aaPredicted RBP17.39■□□□□ 0.37
COL4A1-204ENST00000543140 SGSM1Q2NKQ1 1148 aa17.39■□□□□ 0.37
COL4A1-204ENST00000543140 ZNF792Q3KQV3 632 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms