RNA–Protein interactions for RNA: ENST00000542570.5

TOP3A-208, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-208ENST00000542570 TIPINQ9BVW5 301 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 NIF3L1Q9GZT8 377 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 XPNPEP3Q9NQH7 507 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 GPATCH2LQ9NWQ4 482 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 FEZ2Q9UHY8 353 aaPredicted RBP10.77□□□□□ -0.69
TOP3A-208ENST00000542570 SIK3Q9Y2K2 1263 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 LACTBL1A8MY62 500 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 DDX3XO00571 662 aaKnown RBP eCLIP10.77□□□□□ -0.692e-11■■■□□ 16.2
TOP3A-208ENST00000542570 ITGA4P13612 1032 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 ZBTB16Q05516 673 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 PBKQ96KB5 322 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 DMGDHQ9UI17 866 aaKnown RBP10.77□□□□□ -0.69
TOP3A-208ENST00000542570 CCDC151A5D8V7 595 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 CLTAP09496 248 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 CARSP49589 748 aaKnown RBP10.77□□□□□ -0.69
TOP3A-208ENST00000542570 NOTUMQ6P988 496 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 ABHD15Q6UXT9 468 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 RNF10Q8N5U6 811 aaKnown RBP10.77□□□□□ -0.69
TOP3A-208ENST00000542570 DNAAF3Q8N9W5 541 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 RNF139Q8WU17 664 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 EDEM3Q9BZQ6 932 aa10.77□□□□□ -0.69
TOP3A-208ENST00000542570 CRYBG1Q9Y4K1 1723 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 WDR91A4D1P6 747 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 ATP2A2P16615 1042 aaKnown RBP10.76□□□□□ -0.69
TOP3A-208ENST00000542570 ARL4AP40617 200 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 ZKSCAN8Q15776 578 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-208ENST00000542570 DEFB115Q30KQ5 88 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 CCDC38Q502W7 563 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 CCDC137Q6PK04 289 aaKnown RBP10.76□□□□□ -0.69
TOP3A-208ENST00000542570 APPL2Q8NEU8 664 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 ARHGEF26Q96DR7 871 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 FMO2Q99518 471 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 GOLGA2P5Q9HBQ8 144 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 NUDT5Q9UKK9 219 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.76□□□□□ -0.69
TOP3A-208ENST00000542570 MANSC4A6NHS7 340 aaPredicted RBP10.76□□□□□ -0.69
TOP3A-208ENST00000542570 ASAP2O43150 1006 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 SPRYD7Q5W111 196 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 TRIM11Q96F44 468 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 GAD1Q99259 594 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 PRKAG2Q9UGJ0 569 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 PKD1L3Q7Z443 1732 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 NHSL1Q5SYE7 1610 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 SCAMP3O14828 347 aaKnown RBP10.76□□□□□ -0.69
TOP3A-208ENST00000542570 RNF40O75150 1001 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 ACO1P21399 889 aaKnown RBP10.76□□□□□ -0.69
TOP3A-208ENST00000542570 GNGT1P63211 74 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 JADE1Q6IE81 842 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 HDAC7Q8WUI4 952 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 LRRN4Q8WUT4 740 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 AGAP3Q96P47 875 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 C17orf75Q9HAS0 396 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 NKIRAS1Q9NYS0 192 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 CACNG4Q9UBN1 327 aa10.76□□□□□ -0.69
TOP3A-208ENST00000542570 MCF2LO15068 1137 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 TADA2AO75478 443 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 GNL1P36915 607 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-208ENST00000542570 SEMA3FQ13275 785 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 MFSD10Q14728 455 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 DCAF6Q58WW2 860 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 NOP9Q86U38 636 aaKnown RBP10.75□□□□□ -0.69
TOP3A-208ENST00000542570 DAW1Q8N136 415 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 NT5C1AQ9BXI3 368 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 NOVA2Q9UNW9 492 aaKnown RBP10.75□□□□□ -0.69
TOP3A-208ENST00000542570 KCNH4Q9UQ05 1017 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 BTAF1O14981 1849 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 AOC2O75106 756 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 NFICP08651 508 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 ABCD1P33897 745 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 NIPA1Q7RTP0 329 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 MAP4K3Q8IVH8 894 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 SEMA4DQ92854 862 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 PGLYRP2Q96PD5 576 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 PNKPQ96T60 521 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.75□□□□□ -0.695e-7■■■□□ 17.1
TOP3A-208ENST00000542570 RNF208Q9H0X6 261 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 C10orf88Q9H8K7 445 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 METTL5Q9NRN9 209 aaKnown RBP10.75□□□□□ -0.69
TOP3A-208ENST00000542570 SCINQ9Y6U3 715 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 ZC3H11AO75152 810 aaKnown RBP eCLIP10.75□□□□□ -0.69
TOP3A-208ENST00000542570 STK10O94804 968 aaKnown RBP10.75□□□□□ -0.69
TOP3A-208ENST00000542570 ZBED1O96006 694 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 ATXN8OSP0DMR3 200 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 GRIK1P39086 918 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 SPIRE1Q08AE8 756 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 ZNF484Q5JVG2 852 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 RNF180Q86T96 592 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 NETO2Q8NC67 525 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 GPR20Q99678 358 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 XPNPEP1Q9NQW7 623 aa10.75□□□□□ -0.69
TOP3A-208ENST00000542570 ABI2Q9NYB9 513 aaPredicted RBP10.75□□□□□ -0.69
TOP3A-208ENST00000542570 ANO9A1A5B4 782 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 KBTBD13C9JR72 458 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 GARTP22102 1010 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 GPS1Q13098 491 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 FAXCQ5TGI0 409 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 PALB2Q86YC2 1186 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 CCDC117Q8IWD4 279 aaPredicted RBP10.74□□□□□ -0.69
TOP3A-208ENST00000542570 SH2D3CQ8N5H7 860 aa10.74□□□□□ -0.69
TOP3A-208ENST00000542570 TPCN2Q8NHX9 752 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms