RNA–Protein interactions for RNA: ENST00000542355.6

SCG3-202, Transcript of secretogranin III, humanhuman

TSL 2 BASIC

Gene SCG3, Length 2,163 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3-202ENST00000542355 NENFQ9UMX5 172 aa11.82□□□□□ -0.52
SCG3-202ENST00000542355 KAT6AQ92794 2004 aa11.82□□□□□ -0.52
SCG3-202ENST00000542355 MMEP08473 750 aa11.82□□□□□ -0.52
SCG3-202ENST00000542355 CTSHP09668 335 aa11.82□□□□□ -0.52
SCG3-202ENST00000542355 ACO1P21399 889 aaKnown RBP11.82□□□□□ -0.52
SCG3-202ENST00000542355 TBXAS1P24557 533 aaPredicted RBP11.82□□□□□ -0.52
SCG3-202ENST00000542355 AXLP30530 894 aa11.82□□□□□ -0.52
SCG3-202ENST00000542355 MNX1P50219 401 aaPredicted RBP11.82□□□□□ -0.52
SCG3-202ENST00000542355 PDE6CP51160 858 aa11.82□□□□□ -0.52
SCG3-202ENST00000542355 MRPS6P82932 125 aaKnown RBP11.82□□□□□ -0.52
SCG3-202ENST00000542355 RSPH3Q86UC2 560 aa11.82□□□□□ -0.52
SCG3-202ENST00000542355 RNF10Q8N5U6 811 aaKnown RBP11.82□□□□□ -0.52
SCG3-202ENST00000542355 C1orf127Q8N9H9 656 aa11.82□□□□□ -0.52
SCG3-202ENST00000542355 TRIM58Q8NG06 486 aa11.82□□□□□ -0.52
SCG3-202ENST00000542355 NOX5Q96PH1 765 aa11.82□□□□□ -0.52
SCG3-202ENST00000542355 HMX1Q9NP08 348 aaPredicted RBP11.82□□□□□ -0.52
SCG3-202ENST00000542355 PCDHB4Q9Y5E5 795 aa11.82□□□□□ -0.52
SCG3-202ENST00000542355 CDY2AQ9Y6F7 541 aa11.82□□□□□ -0.52
SCG3-202ENST00000542355 ANKRD62A6NC57 917 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 ITGB3P05106 788 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 CHRNB2P17787 502 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 GRK4P32298 578 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 GALCP54803 685 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 TMEM132DQ14C87 1099 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 PTGISQ16647 500 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 ZNF699Q32M78 642 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 TMEM270Q6UE05 265 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 SERINC5Q86VE9 423 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 SLAIN1Q8ND83 568 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 ALS2CR12Q96Q35 445 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 PCDHB18PQ96TA0 734 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 XYLT2Q9H1B5 865 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 CXCL16Q9H2A7 254 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 SAGE1Q9NXZ1 904 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 NXF1Q9UBU9 619 aaKnown RBP11.81□□□□□ -0.52
SCG3-202ENST00000542355 SIX4Q9UIU6 781 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 NOC2LQ9Y3T9 749 aaKnown RBP11.81□□□□□ -0.52
SCG3-202ENST00000542355 TRIM17Q9Y577 477 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 DNAH12Q6ZR08 3092 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 SLU7O95391 586 aaKnown RBP11.81□□□□□ -0.52
SCG3-202ENST00000542355 ATP1A1P05023 1023 aaKnown RBP11.81□□□□□ -0.52
SCG3-202ENST00000542355 ABCB4P21439 1286 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 AKAP5P24588 427 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 NOP2P46087 812 aaKnown RBP11.81□□□□□ -0.52
SCG3-202ENST00000542355 ACLYP53396 1101 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 FMO1Q01740 532 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 ITGA7Q13683 1181 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 SESTD1Q86VW0 696 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 FAM228AQ86W67 206 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 KIF12Q96FN5 646 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 APOL6Q9BWW8 343 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 NXF3Q9H4D5 531 aaKnown RBP11.81□□□□□ -0.52
SCG3-202ENST00000542355 TRPV2Q9Y5S1 764 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 MRFAP1Q9Y605 127 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 PTCH2Q9Y6C5 1203 aa11.81□□□□□ -0.52
SCG3-202ENST00000542355 CAPN15O75808 1086 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 CHRNA1P02708 482 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 FTLP02792 175 aaPredicted RBP11.8□□□□□ -0.52
SCG3-202ENST00000542355 CD58P19256 250 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 THPOP40225 353 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 GUCY2FP51841 1108 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 YARSP54577 528 aaKnown RBP11.8□□□□□ -0.52
SCG3-202ENST00000542355 CDR2Q01850 454 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 NFX1Q12986 1120 aaKnown RBP11.8□□□□□ -0.52
SCG3-202ENST00000542355 WDR72Q3MJ13 1102 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 LHX8Q68G74 356 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 CD302Q8IX05 232 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 DDX1Q92499 740 aaKnown RBP11.8□□□□□ -0.52
SCG3-202ENST00000542355 NIF3L1Q9GZT8 377 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 PLEKHA5Q9HAU0 1116 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 RNF19AQ9NV58 838 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 INTUQ9ULD6 942 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 C2CD2Q9Y426 696 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 PCDHB2Q9Y5E7 798 aa11.8□□□□□ -0.52
SCG3-202ENST00000542355 BTNL10A8MVZ5 291 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 RPS6KA5O75582 802 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 PALMO75781 387 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 WEE2P0C1S8 567 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 GTF2F1P35269 517 aaKnown RBP eCLIP11.79□□□□□ -0.52
SCG3-202ENST00000542355 BPIFB4P59827 614 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 UBXN11Q5T124 520 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 TWF2Q6IBS0 349 aaKnown RBP11.79□□□□□ -0.52
SCG3-202ENST00000542355 SCARA5Q6ZMJ2 495 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 SH3TC2Q8TF17 1288 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 TSC1Q92574 1164 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 GLT1D1Q96MS3 346 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 ZMAT2Q96NC0 199 aaKnown RBP11.79□□□□□ -0.52
SCG3-202ENST00000542355 CARD6Q9BX69 1037 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 THAP2Q9H0W7 228 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 RNF39Q9H2S5 420 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 TRMT13Q9NUP7 481 aaKnown RBP11.79□□□□□ -0.52
SCG3-202ENST00000542355 DPP3Q9NY33 737 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 CDC23Q9UJX2 597 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 AGAP1Q9UPQ3 857 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 NOD1Q9Y239 953 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 JRKLQ9Y4A0 524 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 CABYRO75952 493 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 RECQL4O94761 1208 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 TMEM253P0C7T8 217 aa11.79□□□□□ -0.52
SCG3-202ENST00000542355 ZNF16P17020 682 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms