RNA–Protein interactions for RNA: ENST00000542032.1

LEMD3-204, Transcript of LEM domain containing 3, humanhuman

TSL 3

Gene LEMD3, Length 645 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-204ENST00000542032 MARS2Q96GW9 593 aaKnown RBP4.78□□□□□ -1.64
LEMD3-204ENST00000542032 MED15Q96RN5 788 aa4.78□□□□□ -1.64
LEMD3-204ENST00000542032 GALNT9Q9HCQ5 603 aa4.78□□□□□ -1.64
LEMD3-204ENST00000542032 TDP1Q9NUW8 608 aa4.78□□□□□ -1.64
LEMD3-204ENST00000542032 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.78□□□□□ -1.64
LEMD3-204ENST00000542032 PCDHA13Q9Y5I0 950 aa4.78□□□□□ -1.64
LEMD3-204ENST00000542032 AATKQ6ZMQ8 1374 aa4.78□□□□□ -1.64
LEMD3-204ENST00000542032 CDHR4A6H8M9 788 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 HAUS5O94927 633 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 ESRRBO95718 433 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 SBK3P0C264 359 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 ITGAMP11215 1152 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 FCER1AP12319 257 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 NCLP19338 710 aaKnown RBP4.77□□□□□ -1.65
LEMD3-204ENST00000542032 CLK3P49761 638 aaKnown RBP4.77□□□□□ -1.65
LEMD3-204ENST00000542032 ITKQ08881 620 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 RAB39AQ14964 217 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 ODF1Q14990 250 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 SPDYE7PQ495Y7 208 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 PABPC1LQ4VXU2 614 aaKnown RBP4.77□□□□□ -1.65
LEMD3-204ENST00000542032 PRR16Q569H4 304 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 IL17RDQ8NFM7 739 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 MTMR8Q96EF0 704 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 GPATCH3Q96I76 525 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 PNKPQ96T60 521 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 ASPSCR1Q9BZE9 553 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 PRDM13Q9H4Q3 707 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 UNKLQ9H9P5 680 aaKnown RBP4.77□□□□□ -1.65
LEMD3-204ENST00000542032 VSX1Q9NZR4 365 aaPredicted RBP4.77□□□□□ -1.65
LEMD3-204ENST00000542032 CALCOCO1Q9P1Z2 691 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 SERPINB13Q9UIV8 391 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 PCDHB1Q9Y5F3 818 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 NOX1Q9Y5S8 564 aa4.77□□□□□ -1.65
LEMD3-204ENST00000542032 CCDC154A6NI56 674 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 KIAA0391O15091 583 aaKnown RBP4.76□□□□□ -1.65
LEMD3-204ENST00000542032 GRM6O15303 877 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 ERN1O75460 977 aaKnown RBP4.76□□□□□ -1.65
LEMD3-204ENST00000542032 ZRANB2O95218 330 aaKnown RBP eCLIP4.76□□□□□ -1.65
LEMD3-204ENST00000542032 FDXRP22570 491 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 VAV2P52735 878 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 ADKP55263 362 aaKnown RBP4.76□□□□□ -1.65
LEMD3-204ENST00000542032 EVA1CP58658 441 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 KRTAP10-11P60412 298 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 TLE1Q04724 770 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 IL10RAQ13651 578 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 ACAP2Q15057 778 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 ATP2B3Q16720 1220 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 NSUN6Q8TEA1 469 aaKnown RBP4.76□□□□□ -1.65
LEMD3-204ENST00000542032 SLC9A6Q92581 669 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 RAB24Q969Q5 203 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 TMX3Q96JJ7 454 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 Q96MF0 132 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 PCDH12Q9NPG4 1184 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 RNF181Q9P0P0 153 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 SPEF1Q9Y4P9 236 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 MRFAP1Q9Y605 127 aa4.76□□□□□ -1.65
LEMD3-204ENST00000542032 ZAR1LA6NP61 321 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 XPOTO43592 962 aaKnown RBP4.75□□□□□ -1.65
LEMD3-204ENST00000542032 SLC43A1O75387 559 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 MTHFD1P11586 935 aaKnown RBP4.75□□□□□ -1.65
LEMD3-204ENST00000542032 FBLP22087 321 aaKnown RBP4.75□□□□□ -1.65
LEMD3-204ENST00000542032 FXR1P51114 621 aaKnown RBP eCLIP4.75□□□□□ -1.65
LEMD3-204ENST00000542032 ZNF280AP59817 542 aaPredicted RBP4.75□□□□□ -1.65
LEMD3-204ENST00000542032 KIF23Q02241 960 aaPredicted RBP4.75□□□□□ -1.65
LEMD3-204ENST00000542032 DSC2Q02487 901 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 CREMQ03060 361 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 MPP3Q13368 585 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 FAM50AQ14320 339 aaKnown RBP4.75□□□□□ -1.65
LEMD3-204ENST00000542032 FLYWCH1Q4VC44 716 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 SP5Q6BEB4 398 aaPredicted RBP4.75□□□□□ -1.65
LEMD3-204ENST00000542032 LNX2Q8N448 690 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 TBC1D15Q8TC07 691 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 CAVIN3Q969G5 261 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 RNF31Q96EP0 1072 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 BRINP2Q9C0B6 783 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 JKAMPQ9P055 326 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 COL4A3BPQ9Y5P4 624 aa4.75□□□□□ -1.65
LEMD3-204ENST00000542032 CFAP20Q9Y6A4 193 aaKnown RBP4.75□□□□□ -1.65
LEMD3-204ENST00000542032 SALL3Q9BXA9 1300 aa4.74□□□□□ -1.65
LEMD3-204ENST00000542032 A0A1W2PS29 197 aa4.74□□□□□ -1.65
LEMD3-204ENST00000542032 PPP4R3AQ6IN85 833 aa4.74□□□□□ -1.65
LEMD3-204ENST00000542032 FOXR2Q6PJQ5 311 aa4.74□□□□□ -1.65
LEMD3-204ENST00000542032 Q6ZNX1 250 aa4.74□□□□□ -1.65
LEMD3-204ENST00000542032 TMPRSS9Q7Z410 1059 aa4.74□□□□□ -1.65
LEMD3-204ENST00000542032 RSPH3Q86UC2 560 aa4.74□□□□□ -1.65
LEMD3-204ENST00000542032 FAM98AQ8NCA5 519 aaKnown RBP4.74□□□□□ -1.65
LEMD3-204ENST00000542032 SIMC1Q8NDZ2 872 aa4.74□□□□□ -1.65
LEMD3-204ENST00000542032 NTN5Q8WTR8 489 aaPredicted RBP4.74□□□□□ -1.65
LEMD3-204ENST00000542032 BBC3Q96PG8 261 aaPredicted RBP4.74□□□□□ -1.65
LEMD3-204ENST00000542032 TLR10Q9BXR5 811 aa4.74□□□□□ -1.65
LEMD3-204ENST00000542032 CTTNBP2NLQ9P2B4 639 aa4.74□□□□□ -1.65
LEMD3-204ENST00000542032 KIAA0355O15063 1070 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 AGFG2O95081 481 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 NUDT3O95989 172 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 PTPN21Q16825 1174 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 UTP14CQ5TAP6 766 aaKnown RBP4.73□□□□□ -1.65
LEMD3-204ENST00000542032 EFCAB2Q5VUJ9 269 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 KIAA0895LQ68EN5 471 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 ZNF365Q70YC5 407 aa4.73□□□□□ -1.65
LEMD3-204ENST00000542032 KAT5Q92993 513 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms