RNA–Protein interactions for RNA: ENST00000541963.5

CPSF7-220, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4 BASIC

Gene CPSF7, Length 549 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-220ENST00000541963 DNAJC18Q9H819 358 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 ZFP64Q9NPA5 681 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 HELLSQ9NRZ9 838 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 TCEAL9Q9UHQ7 104 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 SIT1Q9Y3P8 196 aa6.31□□□□□ -1.4
CPSF7-220ENST00000541963 NOC2LQ9Y3T9 749 aaKnown RBP6.31□□□□□ -1.4
CPSF7-220ENST00000541963 SGSM2O43147 1006 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 CYP2C8P10632 490 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 CYP2D6P10635 497 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 SLC9A1P19634 815 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 EPHA5P54756 1037 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 MCMDC2Q4G0Z9 681 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 TREML2Q5T2D2 321 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 CC2D1AQ6P1N0 951 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-220ENST00000541963 LHFPL2Q6ZUX7 228 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 CNTD1Q8N815 330 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 RAET1EQ8TD07 263 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 SH3RF2Q8TEC5 729 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 COA7Q96BR5 231 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 DYNLL2Q96FJ2 89 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 C12orf42Q96LP6 360 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 KIAA1683Q9H0B3 1180 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 NAPBQ9H115 298 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 RXFP1Q9HBX9 757 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 HOXC10Q9NYD6 342 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 H2AFY2Q9P0M6 372 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-220ENST00000541963 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.3□□□□□ -1.4
CPSF7-220ENST00000541963 KCNG1Q9UIX4 513 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 B3GALT1Q9Y5Z6 326 aa6.3□□□□□ -1.4
CPSF7-220ENST00000541963 ATAD5Q96QE3 1844 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 SALL3Q9BXA9 1300 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 TCRBV5S2A0A599 114 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 PRAMEF25A6NGN4 478 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 TNPO2O14787 897 aaKnown RBP6.29□□□□□ -1.4
CPSF7-220ENST00000541963 BUB1BO60566 1050 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-220ENST00000541963 CHGBP05060 677 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 PTPN1P18031 435 aaKnown RBP6.29□□□□□ -1.4
CPSF7-220ENST00000541963 SDHBP21912 280 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 CD40P25942 277 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 MAPKAPK2P49137 400 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 CCNA1P78396 465 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 IRX6P78412 446 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-220ENST00000541963 JAG1P78504 1218 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 PRR5P85299 388 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 GRIN1Q05586 938 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 ADCY1Q08828 1119 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 SEPT2Q15019 361 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 FAM110CQ1W6H9 321 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 SLC9C1Q4G0N8 1177 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 BROXQ5VW32 411 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 CPZQ66K79 652 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 ZC3H14Q6PJT7 736 aaKnown RBP6.29□□□□□ -1.4
CPSF7-220ENST00000541963 IRF2BP1Q8IU81 584 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 NOSTRINQ8IVI9 506 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 RBM12BQ8IXT5 1001 aaKnown RBP6.29□□□□□ -1.4
CPSF7-220ENST00000541963 ANKRD13CQ8N6S4 541 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 NAV1Q8NEY1 1877 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 GPRC5AQ8NFJ5 357 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 LPAR1Q92633 364 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 DLG3Q92796 817 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 E2F7Q96AV8 911 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 AHCYL2Q96HN2 611 aaKnown RBP6.29□□□□□ -1.4
CPSF7-220ENST00000541963 ELF4Q99607 663 aaPredicted RBP6.29□□□□□ -1.4
CPSF7-220ENST00000541963 NGRNQ9NPE2 291 aaKnown RBP6.29□□□□□ -1.4
CPSF7-220ENST00000541963 SRRDQ9UH36 339 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 G3BP2Q9UN86 482 aaKnown RBP6.29□□□□□ -1.4
CPSF7-220ENST00000541963 SPEF1Q9Y4P9 236 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 PHIPQ8WWQ0 1821 aa6.29□□□□□ -1.4
CPSF7-220ENST00000541963 MYPNQ86TC9 1320 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 ADGRA2Q96PE1 1338 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 SIPA1L1O43166 1804 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 CYP2D7A0A087X1C5 515 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 EFEMP2O95967 443 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 GLI1P08151 1106 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 TSPY3P0CV98 308 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 TSPY8P0CW00 308 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 AKR1B1P15121 316 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 GUCY1A2P33402 732 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 HERVK_113P62684 666 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 UBXN2AP68543 259 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 ICA1Q05084 483 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 MTMR1Q13613 665 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 COG2Q14746 738 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 FYB2Q5VWT5 728 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 MPZL3Q6UWV2 235 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 RPTNQ6XPR3 784 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 CATSPERGQ6ZRH7 1159 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 RASSF3Q86WH2 238 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 ZSWIM9Q86XI8 627 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 SLC44A5Q8NCS7 719 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 ACER1Q8TDN7 264 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 COG1Q8WTW3 980 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 ALG3Q92685 438 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 TSPAN17Q96FV3 270 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 SEC62Q99442 399 aaKnown RBP6.28□□□□□ -1.4
CPSF7-220ENST00000541963 P2RX7Q99572 595 aaKnown RBP6.28□□□□□ -1.4
CPSF7-220ENST00000541963 SMAD5Q99717 465 aaKnown RBP6.28□□□□□ -1.4
CPSF7-220ENST00000541963 MENTQ9BUN1 341 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 DIAPH3Q9NSV4 1193 aa6.28□□□□□ -1.4
CPSF7-220ENST00000541963 KLHL42Q9P2K6 505 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms