RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 KLHL10Q6JEL2 608 aa20.28■□□□□ 0.84
VPS33A-205ENST00000541169 TTI2Q6NXR4 508 aa20.28■□□□□ 0.84
VPS33A-205ENST00000541169 FILIP1Q7Z7B0 1213 aa20.28■□□□□ 0.84
VPS33A-205ENST00000541169 EFCAB13Q8IY85 973 aa20.28■□□□□ 0.84
VPS33A-205ENST00000541169 CCDC127Q96BQ5 260 aa20.28■□□□□ 0.84
VPS33A-205ENST00000541169 PAAF1Q9BRP4 392 aa20.28■□□□□ 0.84
VPS33A-205ENST00000541169 TTPALQ9BTX7 342 aa20.28■□□□□ 0.84
VPS33A-205ENST00000541169 EMILIN2Q9BXX0 1053 aa20.28■□□□□ 0.84
VPS33A-205ENST00000541169 GOLGA2P5Q9HBQ8 144 aa20.28■□□□□ 0.84
VPS33A-205ENST00000541169 AKAP3O75969 853 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 PRKCSHP14314 528 aaPredicted RBP20.27■□□□□ 0.84
VPS33A-205ENST00000541169 DNAJB1P25685 340 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 GTF2H1P32780 548 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 AARSP49588 968 aaKnown RBP eCLIP20.27■□□□□ 0.84
VPS33A-205ENST00000541169 TAF6P49848 677 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 VAMP7P51809 220 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 DSG1Q02413 1049 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 BFSP1Q12934 665 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 MYO1EQ12965 1108 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 SV2CQ496J9 727 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 PPFIBP1Q86W92 1011 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 CSGALNACT2Q8N6G5 542 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 APPL2Q8NEU8 664 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 BCL7CQ8WUZ0 217 aaPredicted RBP20.27■□□□□ 0.84
VPS33A-205ENST00000541169 SUSD3Q96L08 255 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 ANO10Q9NW15 660 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 DSEQ9UL01 958 aa20.27■□□□□ 0.84
VPS33A-205ENST00000541169 TRANK1O15050 2925 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 CHD7Q9P2D1 2997 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 CXCL14O95715 111 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 SRGAP2BP0DMP2 458 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 FGFR3P22607 806 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 CASP4P49662 377 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 LILRA4P59901 499 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 ERVFC1P60507 584 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 FAM171A1Q5VUB5 890 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 ANKS3Q6ZW76 656 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 FRMD5Q7Z6J6 570 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 GPR62Q9BZJ7 368 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 MTMR12Q9C0I1 747 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 FNIP2Q9P278 1114 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 DPP7Q9UHL4 492 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 CTNND2Q9UQB3 1225 aa20.26■□□□□ 0.83
VPS33A-205ENST00000541169 C2orf71A6NGG8 1288 aa20.25■□□□□ 0.83
VPS33A-205ENST00000541169 M0QZQ0 153 aa20.25■□□□□ 0.83
VPS33A-205ENST00000541169 TULP1O00294 542 aaPredicted RBP20.25■□□□□ 0.83
VPS33A-205ENST00000541169 PMS1P54277 932 aaKnown RBP20.25■□□□□ 0.83
VPS33A-205ENST00000541169 KIAA0319Q5VV43 1072 aa20.25■□□□□ 0.83
VPS33A-205ENST00000541169 ELMSAN1Q6PJG2 1045 aa20.25■□□□□ 0.83
VPS33A-205ENST00000541169 C1orf127Q8N9H9 656 aa20.25■□□□□ 0.83
VPS33A-205ENST00000541169 SPATA18Q8TC71 538 aa20.25■□□□□ 0.83
VPS33A-205ENST00000541169 PIK3R5Q8WYR1 880 aa20.25■□□□□ 0.83
VPS33A-205ENST00000541169 VN1R3Q9BXE9 311 aa20.25■□□□□ 0.83
VPS33A-205ENST00000541169 ARMCX3Q9UH62 379 aaPredicted RBP20.25■□□□□ 0.83
VPS33A-205ENST00000541169 PCDHB8Q9UN66 801 aa20.25■□□□□ 0.83
VPS33A-205ENST00000541169 TRIM49BA6NDI0 452 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 H7C4K7 107 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 ITGB3P05106 788 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 ADH1AP07327 375 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 TYMPP19971 482 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 ATICP31939 592 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 PTPN14Q15678 1187 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 STX1AQ16623 288 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 DPCR1Q3MIW9 517 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 CAVIN1Q6NZI2 390 aaKnown RBP20.24■□□□□ 0.83
VPS33A-205ENST00000541169 CD300LGQ6UXG3 332 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 TRAPPC11Q7Z392 1133 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 C3orf58Q8NDZ4 430 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 MAFAQ8NHW3 353 aaPredicted RBP20.24■□□□□ 0.83
VPS33A-205ENST00000541169 HASPINQ8TF76 798 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 NAT10Q9H0A0 1025 aaKnown RBP20.24■□□□□ 0.83
VPS33A-205ENST00000541169 TLE6Q9H808 572 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 RXFP1Q9HBX9 757 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 AGAP1Q9UPQ3 857 aa20.24■□□□□ 0.83
VPS33A-205ENST00000541169 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.23■□□□□ 0.83
VPS33A-205ENST00000541169 KPNA7A9QM74 516 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 LILRB3O75022 631 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 PHACTR2O75167 634 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 STAU1O95793 577 aaKnown RBP20.23■□□□□ 0.83
VPS33A-205ENST00000541169 KRT19P08727 400 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 FAM163BP0C2L3 166 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 CCDC192P0DO97 292 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 ODC1P11926 461 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 POLR2BP30876 1174 aaKnown RBP20.23■□□□□ 0.83
VPS33A-205ENST00000541169 MARSP56192 900 aaKnown RBP20.23■□□□□ 0.83
VPS33A-205ENST00000541169 WNT7BP56706 349 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 TRPC3Q13507 836 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 TPD52L1Q16890 204 aaPredicted RBP20.23■□□□□ 0.83
VPS33A-205ENST00000541169 PLPP4Q5VZY2 271 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 DSTYKQ6XUX3 929 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 DPH6Q7L8W6 267 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 FAM114A1Q8IWE2 563 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 RABGGTAQ92696 567 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 TAF4BQ92750 862 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 BORCS6Q96GS4 357 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 DUSP9Q99956 384 aaKnown RBP20.23■□□□□ 0.83
VPS33A-205ENST00000541169 GDAP2Q9NXN4 497 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 TMEM63CQ9P1W3 806 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 CACNG4Q9UBN1 327 aa20.23■□□□□ 0.83
VPS33A-205ENST00000541169 BACE2Q9Y5Z0 518 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms