RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 MSANTD3Q96H12 275 aa29.36■■■□□ 2.29
CHFR-218ENST00000540963 SUSD3Q96L08 255 aa29.36■■■□□ 2.29
CHFR-218ENST00000540963 ZNF512Q96ME7 567 aaPredicted RBP29.36■■■□□ 2.29
CHFR-218ENST00000540963 MRPL4Q9BYD3 311 aaKnown RBP29.36■■■□□ 2.29
CHFR-218ENST00000540963 CNTN3Q9P232 1028 aa29.36■■■□□ 2.29
CHFR-218ENST00000540963 AFF4Q9UHB7 1163 aaKnown RBP29.36■■■□□ 2.29
CHFR-218ENST00000540963 NUB1Q9Y5A7 615 aa29.36■■■□□ 2.29
CHFR-218ENST00000540963 STK24Q9Y6E0 443 aa29.36■■■□□ 2.29
CHFR-218ENST00000540963 ACACBO00763 2458 aa29.35■■■□□ 2.29
CHFR-218ENST00000540963 KMT2BQ9UMN6 2715 aaPredicted RBP29.35■■■□□ 2.29
CHFR-218ENST00000540963 JAK2O60674 1132 aa29.35■■■□□ 2.29
CHFR-218ENST00000540963 CCR2P41597 374 aa29.35■■■□□ 2.29
CHFR-218ENST00000540963 VITQ6UXI7 678 aa29.35■■■□□ 2.29
CHFR-218ENST00000540963 ZMAT2Q96NC0 199 aaKnown RBP29.35■■■□□ 2.29
CHFR-218ENST00000540963 ACAP3Q96P50 834 aa29.35■■■□□ 2.29
CHFR-218ENST00000540963 GPR88Q9GZN0 384 aa29.35■■■□□ 2.29
CHFR-218ENST00000540963 PDCD11Q14690 1871 aaKnown RBP29.35■■■□□ 2.29
CHFR-218ENST00000540963 NEFLP07196 543 aa29.34■■■□□ 2.29
CHFR-218ENST00000540963 MCF2P10911 925 aa29.34■■■□□ 2.29
CHFR-218ENST00000540963 GDI1P31150 447 aa29.34■■■□□ 2.29
CHFR-218ENST00000540963 CCT6AP40227 531 aaKnown RBP29.34■■■□□ 2.29
CHFR-218ENST00000540963 FXR2P51116 673 aaKnown RBP eCLIP29.34■■■□□ 2.29
CHFR-218ENST00000540963 ARPP19P56211 112 aa29.34■■■□□ 2.29
CHFR-218ENST00000540963 CTXN3Q4LDR2 81 aa29.34■■■□□ 2.29
CHFR-218ENST00000540963 ZNF280DQ6N043 979 aa29.34■■■□□ 2.29
CHFR-218ENST00000540963 APPL2Q8NEU8 664 aa29.34■■■□□ 2.29
CHFR-218ENST00000540963 LMAN1LQ9HAT1 526 aa29.34■■■□□ 2.29
CHFR-218ENST00000540963 PARD6AQ9NPB6 346 aa29.34■■■□□ 2.29
CHFR-218ENST00000540963 RBM19Q9Y4C8 960 aaKnown RBP29.34■■■□□ 2.29
CHFR-218ENST00000540963 PIAS3Q9Y6X2 628 aa29.34■■■□□ 2.29
CHFR-218ENST00000540963 PROZP22891 400 aa29.33■■■□□ 2.29
CHFR-218ENST00000540963 NPTX2P47972 431 aa29.33■■■□□ 2.29
CHFR-218ENST00000540963 MFSD6LQ8IWD5 586 aa29.33■■■□□ 2.29
CHFR-218ENST00000540963 FOXP1Q9H334 677 aaPredicted RBP29.33■■■□□ 2.29
CHFR-218ENST00000540963 C17orf75Q9HAS0 396 aa29.33■■■□□ 2.29
CHFR-218ENST00000540963 ARHGAP28Q9P2N2 729 aa29.33■■■□□ 2.29
CHFR-218ENST00000540963 RETP07949 1114 aa29.32■■■□□ 2.28
CHFR-218ENST00000540963 FOSBP53539 338 aa29.32■■■□□ 2.28
CHFR-218ENST00000540963 PEX3P56589 373 aa29.32■■■□□ 2.28
CHFR-218ENST00000540963 DMP1Q13316 513 aaPredicted RBP29.32■■■□□ 2.28
CHFR-218ENST00000540963 PDIA5Q14554 519 aa29.32■■■□□ 2.28
CHFR-218ENST00000540963 ZNF174Q15697 407 aa29.32■■■□□ 2.28
CHFR-218ENST00000540963 ECM1Q16610 540 aa29.32■■■□□ 2.28
CHFR-218ENST00000540963 OXCT2Q9BYC2 517 aaPredicted RBP29.32■■■□□ 2.28
CHFR-218ENST00000540963 POLD4Q9HCU8 107 aa29.32■■■□□ 2.28
CHFR-218ENST00000540963 ASAH2Q9NR71 780 aa29.32■■■□□ 2.28
CHFR-218ENST00000540963 CCDC169A6NNP5 214 aa29.31■■■□□ 2.28
CHFR-218ENST00000540963 ZNF263O14978 683 aa29.31■■■□□ 2.28
CHFR-218ENST00000540963 MOSPD3O75425 235 aa29.31■■■□□ 2.28
CHFR-218ENST00000540963 CHRNB1P11230 501 aa29.31■■■□□ 2.28
CHFR-218ENST00000540963 CNR2P34972 360 aa29.31■■■□□ 2.28
CHFR-218ENST00000540963 CXCL12P48061 93 aa29.31■■■□□ 2.28
CHFR-218ENST00000540963 TRAPPC10P48553 1259 aa29.31■■■□□ 2.28
CHFR-218ENST00000540963 OSTNP61366 133 aa29.31■■■□□ 2.28
CHFR-218ENST00000540963 NETO1Q8TDF5 533 aa29.31■■■□□ 2.28
CHFR-218ENST00000540963 ZSWIM3Q96MP5 696 aa29.31■■■□□ 2.28
CHFR-218ENST00000540963 CEP72Q9P209 647 aa29.31■■■□□ 2.28
CHFR-218ENST00000540963 KIAA1024Q9UPX6 916 aa29.31■■■□□ 2.28
CHFR-218ENST00000540963 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.31■■■□□ 2.28
CHFR-218ENST00000540963 ARNTLO00327 626 aa29.3■■■□□ 2.28
CHFR-218ENST00000540963 ABLIM1O14639 778 aa29.3■■■□□ 2.28
CHFR-218ENST00000540963 TWF1Q12792 350 aa29.3■■■□□ 2.28
CHFR-218ENST00000540963 MPZL3Q6UWV2 235 aa29.3■■■□□ 2.28
CHFR-218ENST00000540963 SPEM1Q8N4L4 309 aa29.3■■■□□ 2.28
CHFR-218ENST00000540963 ZSCAN18Q8TBC5 510 aaPredicted RBP29.3■■■□□ 2.28
CHFR-218ENST00000540963 DDX12PQ92771 950 aa29.3■■■□□ 2.28
CHFR-218ENST00000540963 DRC1Q96MC2 740 aa29.3■■■□□ 2.28
CHFR-218ENST00000540963 TARS2Q9BW92 718 aaKnown RBP29.3■■■□□ 2.28
CHFR-218ENST00000540963 LRWD1Q9UFC0 647 aa29.3■■■□□ 2.28
CHFR-218ENST00000540963 RALGAPA1Q6GYQ0 2036 aa29.3■■■□□ 2.28
CHFR-218ENST00000540963 DCDC2BA2VCK2 349 aa29.29■■■□□ 2.28
CHFR-218ENST00000540963 NRG2O14511 850 aaPredicted RBP29.29■■■□□ 2.28
CHFR-218ENST00000540963 FOXD2O60548 495 aaPredicted RBP29.29■■■□□ 2.28
CHFR-218ENST00000540963 PAPSS2O95340 614 aaPredicted RBP29.29■■■□□ 2.28
CHFR-218ENST00000540963 MCM4P33991 863 aa29.29■■■□□ 2.28
CHFR-218ENST00000540963 TTC38Q5R3I4 469 aa29.29■■■□□ 2.28
CHFR-218ENST00000540963 TAS1R3Q7RTX0 852 aa29.29■■■□□ 2.28
CHFR-218ENST00000540963 HS6ST3Q8IZP7 471 aa29.29■■■□□ 2.28
CHFR-218ENST00000540963 BEST2Q8NFU1 509 aa29.29■■■□□ 2.28
CHFR-218ENST00000540963 TBC1D32Q96NH3 1257 aa29.29■■■□□ 2.28
CHFR-218ENST00000540963 TCHPQ9BT92 498 aa29.29■■■□□ 2.28
CHFR-218ENST00000540963 RAB34Q9BZG1 259 aa29.29■■■□□ 2.28
CHFR-218ENST00000540963 KMT5AQ9NQR1 393 aa29.29■■■□□ 2.28
CHFR-218ENST00000540963 DDX19AQ9NUU7 478 aaKnown RBP29.29■■■□□ 2.28
CHFR-218ENST00000540963 KCNG1Q9UIX4 513 aa29.29■■■□□ 2.28
CHFR-218ENST00000540963 PCDHB8Q9UN66 801 aa29.29■■■□□ 2.28
CHFR-218ENST00000540963 SLC30A4O14863 429 aa29.28■■■□□ 2.28
CHFR-218ENST00000540963 ADRB1P08588 477 aa29.28■■■□□ 2.28
CHFR-218ENST00000540963 VIPR2P41587 438 aa29.28■■■□□ 2.28
CHFR-218ENST00000540963 SPEM2Q0P670 501 aa29.28■■■□□ 2.28
CHFR-218ENST00000540963 PLD1Q13393 1074 aa29.28■■■□□ 2.28
CHFR-218ENST00000540963 LRRC32Q14392 662 aa29.28■■■□□ 2.28
CHFR-218ENST00000540963 DAW1Q8N136 415 aa29.28■■■□□ 2.28
CHFR-218ENST00000540963 C18orf25Q96B23 403 aaPredicted RBP29.28■■■□□ 2.28
CHFR-218ENST00000540963 C8orf33Q9H7E9 229 aaPredicted RBP29.28■■■□□ 2.28
CHFR-218ENST00000540963 DNM3Q9UQ16 869 aa29.28■■■□□ 2.28
CHFR-218ENST00000540963 CHADO15335 359 aa29.27■■■□□ 2.28
CHFR-218ENST00000540963 MYL4P12829 197 aa29.27■■■□□ 2.28
CHFR-218ENST00000540963 CPB1P15086 417 aa29.27■■■□□ 2.28
CHFR-218ENST00000540963 PTGDRQ13258 359 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms