RNA–Protein interactions for RNA: ENST00000540486.5

TRAPPC1-202, Transcript of trafficking protein particle complex 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TRAPPC1, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-202ENST00000540486 JAK3P52333 1124 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 CALCRLQ16602 461 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 UVSSAQ2YD98 709 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 TTC38Q5R3I4 469 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 LIN9Q5TKA1 542 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 MCTP1Q6DN14 999 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 TANGO2Q6ICL3 276 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 AGMOQ6ZNB7 445 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 RTL10Q7L3V2 364 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 TRMT1LQ7Z2T5 733 aaKnown RBP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 MIER3Q7Z3K6 550 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 MRPL10Q7Z7H8 261 aaKnown RBP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 KBTBD6Q86V97 674 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 SLFN12Q8IYM2 578 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 RDM1Q8NG50 284 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 NLRP7Q8WX94 980 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 MSANTD3Q96H12 275 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 TRMT61BQ9BVS5 477 aaKnown RBP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 TTC12Q9H892 705 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 RSAD1Q9HA92 442 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 ZNF334Q9HCZ1 680 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 WRAP73Q9P2S5 460 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 PCDHA12Q9UN75 941 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 POLIQ9UNA4 740 aa9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 PRG3Q9Y2Y8 225 aaPredicted RBP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 MTCL1Q9Y4B5 1905 aaKnown RBP9.8□□□□□ -0.84
TRAPPC1-202ENST00000540486 FREM2Q5SZK8 3169 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 H0Y626 953 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 MARCH6O60337 910 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 NEMFO60524 1076 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 SLITRK3O94933 977 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 TRIM16O95361 564 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 POMCP01189 267 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 C8AP07357 584 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 OR1G1P47890 313 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 GNL2Q13823 731 aaKnown RBP9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 EPHA7Q15375 998 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 IL17AQ16552 155 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 PABPC1LQ4VXU2 614 aaKnown RBP9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 DGKKQ5KSL6 1271 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 LURAP1LQ8IV03 231 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 MAP4K3Q8IVH8 894 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 GLYCTKQ8IVS8 523 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 COLGALT2Q8IYK4 626 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 LRRC71Q8N4P6 559 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 ZNF668Q96K58 619 aaPredicted RBP9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 FAM167AQ96KS9 214 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 CEP89Q96ST8 783 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 HSD17B14Q9BPX1 270 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 COLEC11Q9BWP8 271 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 SMOC1Q9H4F8 434 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 UBN1Q9NPG3 1134 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 RGL1Q9NZL6 768 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 MTMR6Q9Y217 621 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 PIN4Q9Y237 131 aaKnown RBP9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 MRPS23Q9Y3D9 190 aaKnown RBP9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 PCDHB2Q9Y5E7 798 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 PIAS3Q9Y6X2 628 aa9.79□□□□□ -0.84
TRAPPC1-202ENST00000540486 WDR81Q562E7 1941 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 ASXL3Q9C0F0 2248 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 TMEM150BA6NC51 233 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 ZBTB39O15060 712 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 CCL16O15467 120 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 CSDE1O75534 798 aaKnown RBP9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 CCDC192P0DO97 292 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 AFF1P51825 1210 aaKnown RBP9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 TARBP2Q15633 366 aaKnown RBP9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 RILPL1Q5EBL4 403 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 NCAPH2Q6IBW4 605 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 FERMT3Q86UX7 667 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 HSCBQ8IWL3 235 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 SYNPOQ8N3V7 929 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 MCRS1Q96EZ8 462 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 SH2D3AQ9BRG2 576 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 NIFKQ9BYG3 293 aaKnown RBP9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 SLC32A1Q9H598 525 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 ZFP14Q9HCL3 533 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 TMEM9BQ9NQ34 198 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 AVENQ9NQS1 362 aaPredicted RBP9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 NRBP2Q9NSY0 501 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 DNMT3BQ9UBC3 853 aaKnown RBP9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 TCEAL9Q9UHQ7 104 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 KLK13Q9UKR3 277 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 NOL7Q9UMY1 257 aaKnown RBP9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 LAMA1P25391 3075 aa9.78□□□□□ -0.84
TRAPPC1-202ENST00000540486 MYH9P35579 1960 aaKnown RBP9.77□□□□□ -0.84
TRAPPC1-202ENST00000540486 A0A087WWV3 80 aa9.77□□□□□ -0.85
TRAPPC1-202ENST00000540486 CAVIN2O95810 425 aa9.77□□□□□ -0.85
TRAPPC1-202ENST00000540486 P4HBP07237 508 aaKnown RBP9.77□□□□□ -0.85
TRAPPC1-202ENST00000540486 OR52Z1P0C646 297 aa9.77□□□□□ -0.85
TRAPPC1-202ENST00000540486 SPATA31C1P0DKV0 1188 aa9.77□□□□□ -0.85
TRAPPC1-202ENST00000540486 PSMC3P17980 439 aa9.77□□□□□ -0.85
TRAPPC1-202ENST00000540486 RPL17P18621 184 aaKnown RBP9.77□□□□□ -0.85
TRAPPC1-202ENST00000540486 PDCP20941 246 aa9.77□□□□□ -0.85
TRAPPC1-202ENST00000540486 CCNE1P24864 410 aa9.77□□□□□ -0.85
TRAPPC1-202ENST00000540486 QARSP47897 775 aaKnown RBP9.77□□□□□ -0.85
TRAPPC1-202ENST00000540486 PSMC5P62195 406 aa9.77□□□□□ -0.85
TRAPPC1-202ENST00000540486 PRKCEQ02156 737 aa9.77□□□□□ -0.85
TRAPPC1-202ENST00000540486 DSC1Q08554 894 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms