RNA–Protein interactions for RNA: ENST00000540418.5

MDM1-210, Transcript of Mdm1 nuclear protein, humanhuman

TSL 1 (best)

Gene MDM1, Length 2,507 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM1-210ENST00000540418 NUB1Q9Y5A7 615 aa16.13■□□□□ 0.17
MDM1-210ENST00000540418 LRRIQ3A6PVS8 624 aaPredicted RBP16.12■□□□□ 0.17
MDM1-210ENST00000540418 IKBKBO14920 756 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 FSCN2O14926 492 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 FOSL2P15408 326 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 PAX3P23760 479 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 AP3M2P53677 418 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 MED15Q96RN5 788 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 ZBP1Q9H171 429 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 TRIP11Q15643 1979 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 FGFR1OPO95684 399 aaKnown RBP16.12■□□□□ 0.17
MDM1-210ENST00000540418 CTSAP10619 480 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 DLG4P78352 724 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 HERC2P3Q9BVR0 1158 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 SRRTQ9BXP5 876 aaKnown RBP16.12■□□□□ 0.17
MDM1-210ENST00000540418 ENTPD7Q9NQZ7 604 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 CDH23Q9H251 3354 aa16.12■□□□□ 0.17
MDM1-210ENST00000540418 CXCL14O95715 111 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 ITGB3P05106 788 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 IRS1P35568 1242 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 RBP5P82980 135 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 BFSP1Q12934 665 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 STX1AQ16623 288 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 USP41Q3LFD5 358 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 TRAPPC11Q7Z392 1133 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 CXorf38Q8TB03 319 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 FAM84AQ96KN4 292 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 CHST7Q9NS84 486 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 AGAP1Q9UPQ3 857 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 PPEF2O14830 753 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 CSPG5O95196 566 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 BRCC3P46736 316 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 LILRA4P59901 499 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 SMC1AQ14683 1233 aaKnown RBP16.11■□□□□ 0.17
MDM1-210ENST00000540418 FAM171A1Q5VUB5 890 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 FRMD5Q7Z6J6 570 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 MRPL43Q8N983 215 aaKnown RBP16.11■□□□□ 0.17
MDM1-210ENST00000540418 METTL14Q9HCE5 456 aaKnown RBP16.11■□□□□ 0.17
MDM1-210ENST00000540418 SSX2IPQ9Y2D8 614 aa16.11■□□□□ 0.17
MDM1-210ENST00000540418 ANK1P16157 1881 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 PDCD11Q14690 1871 aaKnown RBP16.1■□□□□ 0.17
MDM1-210ENST00000540418 GNA14O95837 355 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 POLR2BP30876 1174 aaKnown RBP16.1■□□□□ 0.17
MDM1-210ENST00000540418 PNPLA4P41247 253 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 TIGD5Q53EQ6 642 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 C1orf220Q5T0J3 134 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 KIAA1841Q6NSI8 718 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 SUSD3Q96L08 255 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 MRPL17Q9NRX2 175 aaKnown RBP16.1■□□□□ 0.17
MDM1-210ENST00000540418 ARMCX3Q9UH62 379 aaPredicted RBP16.1■□□□□ 0.17
MDM1-210ENST00000540418 SIX4Q9UIU6 781 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 R3HCC1Q9Y3T6 440 aaKnown RBP16.1■□□□□ 0.17
MDM1-210ENST00000540418 C4BPAP04003 597 aaKnown RBP16.1■□□□□ 0.17
MDM1-210ENST00000540418 KRT19P08727 400 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 AARSP49588 968 aaKnown RBP eCLIP16.1■□□□□ 0.17
MDM1-210ENST00000540418 DSG1Q02413 1049 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 TYRO3Q06418 890 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 KIAA0319Q5VV43 1072 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 PLPP4Q5VZY2 271 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 GPR65Q8IYL9 337 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 LRRC52Q8N7C0 313 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 TTPALQ9BTX7 342 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 NSUN3Q9H649 340 aaKnown RBP16.1■□□□□ 0.17
MDM1-210ENST00000540418 IRAK3Q9Y616 596 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 COL4A4P53420 1690 aaPredicted RBP16.1■□□□□ 0.17
MDM1-210ENST00000540418 TRANK1O15050 2925 aa16.1■□□□□ 0.17
MDM1-210ENST00000540418 PLXNA4Q9HCM2 1894 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 I3L4J1 428 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 URODP06132 367 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 FGFR3P22607 806 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 GLUD2P49448 558 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 TAF6P49848 677 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 SCARA3Q6AZY7 606 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.09■□□□□ 0.17
MDM1-210ENST00000540418 CEP57Q86XR8 500 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 ZNF560Q96MR9 790 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 PCDHGC5Q9Y5F6 944 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 SPTLC1O15269 473 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 LILRB3O75022 631 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 PHACTR2O75167 634 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 CST3P01034 146 aaPredicted RBP16.09■□□□□ 0.17
MDM1-210ENST00000540418 GTF2H1P32780 548 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 TPD52L1Q16890 204 aaPredicted RBP16.09■□□□□ 0.17
MDM1-210ENST00000540418 CCDC40Q4G0X9 1142 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 DSTYKQ6XUX3 929 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 AUTS2Q8WXX7 1259 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 B3GALT6Q96L58 329 aa16.09■□□□□ 0.17
MDM1-210ENST00000540418 C2orf71A6NGG8 1288 aa16.08■□□□□ 0.17
MDM1-210ENST00000540418 HIDE1A8MVS5 230 aa16.08■□□□□ 0.17
MDM1-210ENST00000540418 M0QZQ0 153 aa16.08■□□□□ 0.17
MDM1-210ENST00000540418 SYN3O14994 580 aa16.08■□□□□ 0.17
MDM1-210ENST00000540418 STX10O60499 249 aa16.08■□□□□ 0.17
MDM1-210ENST00000540418 TRIM49P0CI25 452 aa16.08■□□□□ 0.17
MDM1-210ENST00000540418 TRIM49CP0CI26 452 aa16.08■□□□□ 0.17
MDM1-210ENST00000540418 PTPN14Q15678 1187 aa16.08■□□□□ 0.17
MDM1-210ENST00000540418 SV2CQ496J9 727 aa16.08■□□□□ 0.17
MDM1-210ENST00000540418 TDRD10Q5VZ19 366 aaKnown RBP16.08■□□□□ 0.17
MDM1-210ENST00000540418 SV2AQ7L0J3 742 aa16.08■□□□□ 0.17
MDM1-210ENST00000540418 PPP2R3CQ969Q6 453 aa16.08■□□□□ 0.17
MDM1-210ENST00000540418 PCDHB8Q9UN66 801 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms