RNA–Protein interactions for RNA: ENST00000540408.5

COPS7A-211, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-211ENST00000540408 MRPL58Q14197 206 aaKnown RBP13.65□□□□□ -0.22
COPS7A-211ENST00000540408 ECM1Q16610 540 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 KRT79Q5XKE5 535 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 MPZL3Q6UWV2 235 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 MAMSTRQ6ZN01 415 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 YAF2Q8IY57 180 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 FAM184AQ8NB25 1140 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 DEPDC1BQ8WUY9 529 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 E2F7Q96AV8 911 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 TCEAL4Q96EI5 215 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 SUSD3Q96L08 255 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 ZMAT2Q96NC0 199 aaKnown RBP13.65□□□□□ -0.22
COPS7A-211ENST00000540408 TARS2Q9BW92 718 aaKnown RBP13.65□□□□□ -0.22
COPS7A-211ENST00000540408 OXCT2Q9BYC2 517 aaPredicted RBP13.65□□□□□ -0.22
COPS7A-211ENST00000540408 LMAN1LQ9HAT1 526 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 ZNF334Q9HCZ1 680 aaPredicted RBP13.65□□□□□ -0.22
COPS7A-211ENST00000540408 PTPRHQ9HD43 1115 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 PRMT8Q9NR22 394 aaPredicted RBP13.65□□□□□ -0.22
COPS7A-211ENST00000540408 ASAH2Q9NR71 780 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 CNTN3Q9P232 1028 aa13.65□□□□□ -0.22
COPS7A-211ENST00000540408 AFF4Q9UHB7 1163 aaKnown RBP13.65□□□□□ -0.22
COPS7A-211ENST00000540408 HIP1RO75146 1068 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 SEC24AO95486 1093 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 CCR3P51677 355 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 SMTNP53814 917 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 ATXN1P54253 815 aaKnown RBP13.64□□□□□ -0.23
COPS7A-211ENST00000540408 HMGN5P82970 282 aaKnown RBP13.64□□□□□ -0.23
COPS7A-211ENST00000540408 TWF1Q12792 350 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 FZD5Q13467 585 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 C1orf228Q6PIY5 440 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 CELF5Q8N6W0 485 aaKnown RBP13.64□□□□□ -0.23
COPS7A-211ENST00000540408 FBXO18Q8NFZ0 1043 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 CSGALNACT1Q8TDX6 532 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 TBC1D32Q96NH3 1257 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 RTKNQ9BST9 563 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 TIPINQ9BVW5 301 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 CHRDQ9H2X0 955 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 SLITRK6Q9H5Y7 841 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 ARHGAP28Q9P2N2 729 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 LIMCH1Q9UPQ0 1083 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.64□□□□□ -0.23
COPS7A-211ENST00000540408 PIAS3Q9Y6X2 628 aa13.64□□□□□ -0.23
COPS7A-211ENST00000540408 NOTCH4Q99466 2003 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 E9PMD0 336 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 LAD1O00515 517 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 HARSP12081 509 aaKnown RBP13.63□□□□□ -0.23
COPS7A-211ENST00000540408 FCARP24071 287 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 MATR3P43243 847 aaKnown RBP eCLIP13.63□□□□□ -0.23
COPS7A-211ENST00000540408 CXCL12P48061 93 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 PLD1Q13393 1074 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 VITQ6UXI7 678 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 USP37Q86T82 979 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 MAP4K3Q8IVH8 894 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 MFSD6LQ8IWD5 586 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 CCDC83Q8IWF9 413 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 IGSF22Q8N9C0 903 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 ZSCAN18Q8TBC5 510 aaPredicted RBP13.63□□□□□ -0.23
COPS7A-211ENST00000540408 DDX12PQ92771 950 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 C18orf25Q96B23 403 aaPredicted RBP13.63□□□□□ -0.23
COPS7A-211ENST00000540408 MSANTD3Q96H12 275 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 NTPCRQ9BSD7 190 aaKnown RBP13.63□□□□□ -0.23
COPS7A-211ENST00000540408 ANKFY1Q9P2R3 1169 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 PCDHB8Q9UN66 801 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 OTOGLQ3ZCN5 2332 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 COL4A3Q01955 1670 aa13.63□□□□□ -0.23
COPS7A-211ENST00000540408 PATJQ8NI35 1801 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 SLC16A4O15374 487 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 CLDN3O15551 220 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 TOM1L1O75674 476 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 NEFLP07196 543 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 PROZP22891 400 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 CCR2P41597 374 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 EPHB3P54753 998 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 MLLT6P55198 1093 aaPredicted RBP13.62□□□□□ -0.23
COPS7A-211ENST00000540408 YWHAHQ04917 246 aaPredicted RBP13.62□□□□□ -0.23
COPS7A-211ENST00000540408 PTGDRQ13258 359 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 LRRC32Q14392 662 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 LAIR1Q6GTX8 287 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 RINT1Q6NUQ1 792 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 POTEHQ6S545 545 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 DTHD1Q6ZMT9 781 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 HS6ST3Q8IZP7 471 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 C4orf32Q8N8J7 132 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 ZSWIM3Q96MP5 696 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 PLEKHA5Q9HAU0 1116 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 TRPV4Q9HBA0 871 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 CEP72Q9P209 647 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 CACNA1AO00555 2505 aa13.62□□□□□ -0.23
COPS7A-211ENST00000540408 SFI1A8K8P3 1242 aa13.61□□□□□ -0.23
COPS7A-211ENST00000540408 HEPACAM2A8MVW5 462 aa13.61□□□□□ -0.23
COPS7A-211ENST00000540408 DPYSL4O14531 572 aa13.61□□□□□ -0.23
COPS7A-211ENST00000540408 XPOTO43592 962 aaKnown RBP13.61□□□□□ -0.23
COPS7A-211ENST00000540408 CCNE1P24864 410 aa13.61□□□□□ -0.23
COPS7A-211ENST00000540408 VIPR2P41587 438 aa13.61□□□□□ -0.23
COPS7A-211ENST00000540408 ALDH1A3P47895 512 aa13.61□□□□□ -0.23
COPS7A-211ENST00000540408 KPNA1P52294 538 aaPredicted RBP13.61□□□□□ -0.23
COPS7A-211ENST00000540408 EPHA5P54756 1037 aa13.61□□□□□ -0.23
COPS7A-211ENST00000540408 NOLC1Q14978 699 aaKnown RBP eCLIP13.61□□□□□ -0.23
COPS7A-211ENST00000540408 TEAD2Q15562 447 aa13.61□□□□□ -0.23
COPS7A-211ENST00000540408 SLC10A6Q3KNW5 377 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms