RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 DHX38Q92620 1227 aaKnown RBP18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 MYCBPQ99417 103 aaPredicted RBP18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 PSMB7Q99436 277 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 ADAMTS10Q9H324 1103 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 SMARCAL1Q9NZC9 954 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 FAM170AA1A519 330 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 GPR32O75388 356 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 CPP00450 1065 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 ELNP15502 786 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 CXCR5P32302 372 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 EPHB4P54760 987 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 CCDC181Q5TID7 509 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 TADA2BQ86TJ2 420 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 ZNF410Q86VK4 478 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 FAM71AQ8IYT1 594 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 U2AF1L4Q8WU68 220 aaKnown RBP18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 SLC20A1Q8WUM9 679 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 DNAJB3Q8WWF6 145 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 VTI1AQ96AJ9 217 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 CAPS2Q9BXY5 557 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 STIM2Q9P246 746 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 NENFQ9UMX5 172 aa18.31■□□□□ 0.52
PCDHB17P-201ENST00000539533 TRIP12Q14669 1992 aaPredicted RBP18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 SMIM35A0A1B0GVV1 85 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 CYP26A1O43174 497 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 TSPAN1O60635 241 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 APLP1P51693 650 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 EMBQ6PCB8 327 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 WDR49Q8IV35 697 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 FMNL3Q8IVF7 1028 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 MICALL1Q8N3F8 863 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 MTMR12Q9C0I1 747 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 LUC7LQ9NQ29 371 aaKnown RBP18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 EHD2Q9NZN4 543 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 BUB1O43683 1085 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 OPA1O60313 960 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 ZC3H11AO75152 810 aaKnown RBP eCLIP18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 SGPL1O95470 568 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 CST3P01034 146 aaPredicted RBP18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 CXCL8P10145 99 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 ANXA13P27216 316 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 CCT5P48643 541 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 GJA9P57773 515 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 PALB2Q86YC2 1186 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 FAM107BQ9H098 131 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 APOBEC3GQ9HC16 384 aaKnown RBP18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 C1orf112Q9NSG2 853 aa18.3■□□□□ 0.52
PCDHB17P-201ENST00000539533 A0A087WUV0 522 aaPredicted RBP18.29■□□□□ 0.52
PCDHB17P-201ENST00000539533 NCK2O43639 380 aa18.29■□□□□ 0.52
PCDHB17P-201ENST00000539533 ERLIN2O94905 339 aa18.29■□□□□ 0.52
PCDHB17P-201ENST00000539533 GCNT1Q02742 428 aa18.29■□□□□ 0.52
PCDHB17P-201ENST00000539533 WDR44Q5JSH3 913 aa18.29■□□□□ 0.52
PCDHB17P-201ENST00000539533 SLC47A2Q86VL8 602 aa18.29■□□□□ 0.52
PCDHB17P-201ENST00000539533 TSEN2Q8NCE0 465 aaKnown RBP18.29■□□□□ 0.52
PCDHB17P-201ENST00000539533 OSMRQ99650 979 aa18.29■□□□□ 0.52
PCDHB17P-201ENST00000539533 KATNAL1Q9BW62 490 aa18.29■□□□□ 0.52
PCDHB17P-201ENST00000539533 TMCO5BA8MYB1 307 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 SEPT4O43236 478 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 STAG3L1P0CL83 205 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 TNFAIP3P21580 790 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 CCND3P30281 292 aaPredicted RBP18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 PAFAH1B1P43034 410 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 TFAMQ00059 246 aaKnown RBP18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 NCOA4Q13772 614 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 ALS2CLQ60I27 953 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 CXCL17Q6UXB2 119 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 MMS22LQ6ZRQ5 1243 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 SUGP1Q8IWZ8 645 aaKnown RBP18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 REM2Q8IYK8 340 aaPredicted RBP18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 C7orf31Q8N865 590 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 CAVIN3Q969G5 261 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 AGPAT1Q99943 283 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 SEPT11Q9NVA2 429 aaKnown RBP18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 GRIN2DO15399 1336 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 A0A1B0GUA9 196 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 EIF3HO15372 352 aaKnown RBP eCLIP18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 MEFVO15553 781 aaPredicted RBP18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 MCF2P10911 925 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 TNFRSF8P28908 595 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 C10orf76Q5T2E6 689 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 TLR10Q9BXR5 811 aa18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 GCOM2Q9BZD3 368 aaPredicted RBP18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 RPF1Q9H9Y2 349 aaKnown RBP18.28■□□□□ 0.52
PCDHB17P-201ENST00000539533 C17orf102A2RUQ5 167 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 NAP1L1P55209 391 aaKnown RBP18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 GNGT1P63211 74 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 HTRA3P83110 453 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 DUOXA2Q1HG44 320 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 C8orf74Q6P047 294 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 NOP9Q86U38 636 aaKnown RBP18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 CD99L2Q8TCZ2 262 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 TAS2R14Q9NYV8 317 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 NUB1Q9Y5A7 615 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 UMODL1Q5DID0 1318 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 EBAG9O00559 213 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 HSF2BPO75031 334 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 CLSTN1O94985 981 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 RARBP10826 455 aa18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 PRKAR2AP13861 404 aaKnown RBP18.27■□□□□ 0.52
PCDHB17P-201ENST00000539533 AP3M2P53677 418 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms