RNA–Protein interactions for RNA: ENST00000539517.6

NOVA1-206, Transcript of NOVA alternative splicing regulator 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene NOVA1, Length 3,912 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOVA1-206ENST00000539517 MAMDC4Q6UXC1 1216 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 ZNF662Q6ZS27 426 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 TEX2Q8IWB9 1127 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 EMC1Q8N766 993 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 C12orf29Q8N999 325 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 C1orf131Q8NDD1 294 aaKnown RBP6.54□□□□□ -1.36
NOVA1-206ENST00000539517 UBA3Q8TBC4 463 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 TMC2Q8TDI7 906 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 ZNF606Q8WXB4 792 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 TFAP2BQ92481 460 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 ZSWIM1Q9BR11 485 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 C10orf88Q9H8K7 445 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 GOLGA2P5Q9HBQ8 144 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 ADAM22Q9P0K1 906 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 RAB21Q9UL25 225 aa6.54□□□□□ -1.36
NOVA1-206ENST00000539517 PRRC2BQ5JSZ5 2229 aaKnown RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 OGTO15294 1046 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 C22orf31O95567 290 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 MYL3P08590 195 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 LMAN1P49257 510 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 MXD4Q14582 209 aaPredicted RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 DUOXA2Q1HG44 320 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 SMTNL2Q2TAL5 461 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 ZNF699Q32M78 642 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 KCNT1Q5JUK3 1230 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 JADE1Q6IE81 842 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 PLEKHH3Q7Z736 793 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 SH2D3CQ8N5H7 860 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 RNF169Q8NCN4 708 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 LRRN4Q8WUT4 740 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 CASKIN2Q8WXE0 1202 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 DDX1Q92499 740 aaKnown RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 RPF1Q9H9Y2 349 aaKnown RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 CISHQ9NSE2 258 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 SNX24Q9Y343 169 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 C5orf42Q9H799 3197 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 PGRMC1O00264 195 aaKnown RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 PPEF2O14830 753 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 TREHO43280 583 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 RTN2O75298 545 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 MAP3K6O95382 1288 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 CHRM1P11229 460 aaPredicted RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 RFC5P40937 340 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 DHX9Q08211 1270 aaKnown RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 TRIM32Q13049 653 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 MYBPC2Q14324 1141 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 GRIK4Q16099 956 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 CCDC142Q17RM4 750 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 HSP90B2PQ58FF3 399 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 SYCP2LQ5T4T6 812 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 CCDC25Q86WR0 208 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 TXLNBQ8N3L3 684 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 C7orf31Q8N865 590 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 LMBR1Q8WVP7 490 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 VTI1AQ96AJ9 217 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 NEUROG2Q9H2A3 272 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 SMYD3Q9H7B4 428 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 BCCIPQ9P287 314 aaKnown RBP eCLIP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 SAE1Q9UBE0 346 aaPredicted RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 AGAP1Q9UPQ3 857 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 COQ4Q9Y3A0 265 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 MYO1FO00160 1098 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 ACKR2O00590 384 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 KRT10P13645 584 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 POLR2BP30876 1174 aaKnown RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 RABGGTBP53611 331 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 PLTPP55058 493 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 PTENP60484 403 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 HTRA3P83110 453 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 LACTBP83111 547 aaPredicted RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 LAMC2Q13753 1193 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 TUBB2AQ13885 445 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 IFI16Q16666 785 aaKnown RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 HP1BP3Q5SSJ5 553 aaPredicted RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 TMEM40Q8WWA1 233 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 MAGOHBQ96A72 148 aaKnown RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 PWWP2AQ96N64 755 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 TWNKQ96RR1 684 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 TUBB2BQ9BVA1 445 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 EIF2AQ9BY44 585 aaKnown RBP6.53□□□□□ -1.36
NOVA1-206ENST00000539517 ADAM33Q9BZ11 813 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 FAM49BQ9NUQ9 324 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 SNTG2Q9NY99 539 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 PCDHB2Q9Y5E7 798 aa6.53□□□□□ -1.36
NOVA1-206ENST00000539517 F8VP50 259 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 TNPO2O14787 897 aaKnown RBP6.52□□□□□ -1.37
NOVA1-206ENST00000539517 CLTAP09496 248 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 PDGFRBP09619 1106 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 RGS7P49802 495 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 MBTD1Q05BQ5 628 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 UBAP2Q5T6F2 1119 aaKnown RBP6.52□□□□□ -1.37
NOVA1-206ENST00000539517 TXNRD3NBQ6F5E7 133 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 MPZL3Q6UWV2 235 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 CXCL17Q6UXB2 119 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 CATSPER4Q7RTX7 472 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 CCDC33Q8N5R6 958 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 C1orf127Q8N9H9 656 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 SLC17A8Q8NDX2 589 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 AFAP1L1Q8TED9 768 aa6.52□□□□□ -1.37
NOVA1-206ENST00000539517 C18orf25Q96B23 403 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms