RNA–Protein interactions for RNA: ENST00000538998.1

PBX3-212, Transcript of PBX homeobox 3, humanhuman

TSL 2

Gene PBX3, Length 1,035 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-212ENST00000538998 CEP68Q76N32 757 aa15.5■□□□□ 0.07
PBX3-212ENST00000538998 WASF1Q92558 559 aa15.5■□□□□ 0.07
PBX3-212ENST00000538998 TNFRSF25Q93038 417 aa15.5■□□□□ 0.07
PBX3-212ENST00000538998 NACC1Q96RE7 527 aa15.5■□□□□ 0.07
PBX3-212ENST00000538998 TM6SF1Q9BZW5 370 aa15.5■□□□□ 0.07
PBX3-212ENST00000538998 GPR88Q9GZN0 384 aa15.5■□□□□ 0.07
PBX3-212ENST00000538998 C8orf33Q9H7E9 229 aaPredicted RBP15.5■□□□□ 0.07
PBX3-212ENST00000538998 ASAH2Q9NR71 780 aa15.5■□□□□ 0.07
PBX3-212ENST00000538998 PODXLO00592 558 aa15.49■□□□□ 0.07
PBX3-212ENST00000538998 EPB41L2O43491 1005 aaKnown RBP15.49■□□□□ 0.07
PBX3-212ENST00000538998 SPATA31C1P0DKV0 1188 aa15.49■□□□□ 0.07
PBX3-212ENST00000538998 HOXA6P31267 233 aa15.49■□□□□ 0.07
PBX3-212ENST00000538998 EPHA5P54756 1037 aa15.49■□□□□ 0.07
PBX3-212ENST00000538998 SOX4Q06945 474 aaPredicted RBP15.49■□□□□ 0.07
PBX3-212ENST00000538998 MRPL58Q14197 206 aaKnown RBP15.49■□□□□ 0.07
PBX3-212ENST00000538998 DGKKQ5KSL6 1271 aa15.49■□□□□ 0.07
PBX3-212ENST00000538998 CATSPER3Q86XQ3 398 aa15.49■□□□□ 0.07
PBX3-212ENST00000538998 YAF2Q8IY57 180 aa15.49■□□□□ 0.07
PBX3-212ENST00000538998 HS6ST3Q8IZP7 471 aa15.49■□□□□ 0.07
PBX3-212ENST00000538998 FAM160A2Q8N612 972 aaPredicted RBP15.49■□□□□ 0.07
PBX3-212ENST00000538998 MTMR9Q96QG7 549 aa15.49■□□□□ 0.07
PBX3-212ENST00000538998 SLITRK6Q9H5Y7 841 aa15.49■□□□□ 0.07
PBX3-212ENST00000538998 AFF4Q9UHB7 1163 aaKnown RBP15.49■□□□□ 0.07
PBX3-212ENST00000538998 FBXL5Q9UKA1 691 aa15.49■□□□□ 0.07
PBX3-212ENST00000538998 CFAP47Q6ZTR5 3102 aa15.49■□□□□ 0.07
PBX3-212ENST00000538998 F5P12259 2224 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 HEPACAM2A8MVW5 462 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 CHADO15335 359 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 MOSPD3O75425 235 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 MYL4P12829 197 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 CYP11B2P19099 503 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 GRM5P41594 1212 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 KPNA1P52294 538 aaPredicted RBP15.48■□□□□ 0.07
PBX3-212ENST00000538998 TWF1Q12792 350 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 CTXN3Q4LDR2 81 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 XKR4Q5GH76 650 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 N4BP2L1Q5TBK1 243 aaPredicted RBP15.48■□□□□ 0.07
PBX3-212ENST00000538998 HEATR6Q6AI08 1181 aaKnown RBP15.48■□□□□ 0.07
PBX3-212ENST00000538998 ZNF280DQ6N043 979 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 PADI6Q6TGC4 694 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 WDR5BQ86VZ2 330 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 C12orf50Q8NA57 414 aaPredicted RBP15.48■□□□□ 0.07
PBX3-212ENST00000538998 FAM200AQ8TCP9 573 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 IFT74Q96LB3 600 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 POLR3CQ9BUI4 534 aaPredicted RBP15.48■□□□□ 0.07
PBX3-212ENST00000538998 CCDC94Q9BW85 323 aaPredicted RBP15.48■□□□□ 0.07
PBX3-212ENST00000538998 RBM12Q9NTZ6 932 aaKnown RBP15.48■□□□□ 0.07
PBX3-212ENST00000538998 PDRG1Q9NUG6 133 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 CEP72Q9P209 647 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 TNFSF13BQ9Y275 285 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 NUB1Q9Y5A7 615 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 TICRRQ7Z2Z1 1910 aa15.48■□□□□ 0.07
PBX3-212ENST00000538998 NCANO14594 1321 aa15.47■□□□□ 0.07
PBX3-212ENST00000538998 ARHGEF35A5YM69 484 aa15.47■□□□□ 0.07
PBX3-212ENST00000538998 SLC38A8A6NNN8 435 aa15.47■□□□□ 0.07
PBX3-212ENST00000538998 FCHO2Q0JRZ9 810 aa15.47■□□□□ 0.07
PBX3-212ENST00000538998 TEAD2Q15562 447 aa15.47■□□□□ 0.07
PBX3-212ENST00000538998 NT5DC1Q5TFE4 455 aa15.47■□□□□ 0.07
PBX3-212ENST00000538998 ALKAL1Q6UXT8 129 aa15.47■□□□□ 0.07
PBX3-212ENST00000538998 Q6ZS52 159 aa15.47■□□□□ 0.07
PBX3-212ENST00000538998 RALGPS2Q86X27 583 aaPredicted RBP15.47■□□□□ 0.07
PBX3-212ENST00000538998 LOXL4Q96JB6 756 aa15.47■□□□□ 0.07
PBX3-212ENST00000538998 KIFC3Q9BVG8 833 aa15.47■□□□□ 0.07
PBX3-212ENST00000538998 ORC3Q9UBD5 711 aaPredicted RBP15.47■□□□□ 0.07
PBX3-212ENST00000538998 MYBPHLA2RUH7 354 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 SPECC1L-ADORA2AF8WAN1 911 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 TM4SF5O14894 197 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 PFKFB2O60825 505 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 MED24O75448 989 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 CENPBP07199 599 aaPredicted RBP15.46■□□□□ 0.07
PBX3-212ENST00000538998 ZNF806P0C7X5 589 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 CPB1P15086 417 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 GJA1P17302 382 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 RPL9P32969 192 aaKnown RBP15.46■□□□□ 0.07
PBX3-212ENST00000538998 SYNPOQ8N3V7 929 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 APPL2Q8NEU8 664 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 ERMNQ8TAM6 284 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 SHKBP1Q8TBC3 707 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 KIFAP3Q92845 792 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 SUSD3Q96L08 255 aa15.46■□□□□ 0.07
PBX3-212ENST00000538998 K7ERI5 159 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 KCNE1P15382 129 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 RPA1P27694 616 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 CTHP32929 405 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 MCM4P33991 863 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 SOX9P48436 509 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 PLD1Q13393 1074 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 SF3A2Q15428 464 aaKnown RBP15.45■□□□□ 0.06
PBX3-212ENST00000538998 ZNF568Q3ZCX4 644 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 TXNDC11Q6PKC3 985 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 HAUS6Q7Z4H7 955 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 CEP120Q8N960 986 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 ZMAT2Q96NC0 199 aaKnown RBP15.45■□□□□ 0.06
PBX3-212ENST00000538998 CDT1Q9H211 546 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 ARRDC1-AS1Q9H2J1 176 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 CNTN3Q9P232 1028 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 YIPF1Q9Y548 306 aa15.45■□□□□ 0.06
PBX3-212ENST00000538998 PHLPP2Q6ZVD8 1323 aa15.44■□□□□ 0.06
PBX3-212ENST00000538998 WNT7AO00755 349 aa15.44■□□□□ 0.06
PBX3-212ENST00000538998 AXIN1O15169 862 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms