RNA–Protein interactions for RNA: ENST00000538410.5

COPS7A-208, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3 BASIC

Gene COPS7A, Length 1,610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-208ENST00000538410 NUCKS1Q9H1E3 243 aaKnown RBP22.15■■□□□ 1.14
COPS7A-208ENST00000538410 MSRAQ9UJ68 235 aa22.15■■□□□ 1.14
COPS7A-208ENST00000538410 KCNE1P15382 129 aa22.14■■□□□ 1.14
COPS7A-208ENST00000538410 ZBTB6Q15916 424 aa22.14■■□□□ 1.14
COPS7A-208ENST00000538410 WDR44Q5JSH3 913 aa22.14■■□□□ 1.14
COPS7A-208ENST00000538410 SCARA3Q6AZY7 606 aa22.14■■□□□ 1.14
COPS7A-208ENST00000538410 MICAL3Q7RTP6 2002 aa22.14■■□□□ 1.14
COPS7A-208ENST00000538410 TMEM139Q8IV31 216 aa22.14■■□□□ 1.14
COPS7A-208ENST00000538410 C1orf127Q8N9H9 656 aa22.14■■□□□ 1.14
COPS7A-208ENST00000538410 DBF4BQ8NFT6 615 aa22.14■■□□□ 1.14
COPS7A-208ENST00000538410 SEPT8Q92599 483 aa22.14■■□□□ 1.14
COPS7A-208ENST00000538410 BAG1Q99933 345 aaPredicted RBP22.14■■□□□ 1.14
COPS7A-208ENST00000538410 STK33Q9BYT3 514 aa22.14■■□□□ 1.14
COPS7A-208ENST00000538410 UBE2TQ9NPD8 197 aaPredicted RBP22.14■■□□□ 1.14
COPS7A-208ENST00000538410 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.14■■□□□ 1.14
COPS7A-208ENST00000538410 MYO6Q9UM54 1294 aa22.14■■□□□ 1.14
COPS7A-208ENST00000538410 SMIM28A0A1B0GU29 152 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 MEIS3P2A8K0S8 358 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 NRDCO43847 1150 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 CXCL10P02778 98 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 FECHP22830 423 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 HNRNPH3P31942 346 aaKnown RBP22.13■■□□□ 1.13
COPS7A-208ENST00000538410 JAM2P57087 298 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 TRPC3Q13507 836 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 HELQQ8TDG4 1101 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 LINC01599Q8WXQ3 324 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 APBB2Q92870 758 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 LPPQ93052 612 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 TATDN2Q93075 761 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 PGBD4Q96DM1 585 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 SPAG5Q96R06 1193 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 ZNF576Q9H609 170 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 DPP3Q9NY33 737 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 PLAGL2Q9UPG8 496 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 GIT1Q9Y2X7 761 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 SCN1AP35498 2009 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 C9IYK1 514 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 ASS1P00966 412 aaKnown RBP22.13■■□□□ 1.13
COPS7A-208ENST00000538410 ATF7P17544 494 aaPredicted RBP22.13■■□□□ 1.13
COPS7A-208ENST00000538410 RAPGEF1Q13905 1077 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 GLRA4Q5JXX5 417 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 WDR59Q6PJI9 974 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 AGMOQ6ZNB7 445 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 SLC24A5Q71RS6 500 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 ECHDC2Q86YB7 292 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 CXorf38Q8TB03 319 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 SYN2Q92777 582 aaPredicted RBP22.13■■□□□ 1.13
COPS7A-208ENST00000538410 IMPG2Q9BZV3 1241 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 TSPYL2Q9H2G4 693 aaPredicted RBP22.13■■□□□ 1.13
COPS7A-208ENST00000538410 C1orf112Q9NSG2 853 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 SIX4Q9UIU6 781 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 ITGA11Q9UKX5 1188 aa22.13■■□□□ 1.13
COPS7A-208ENST00000538410 ITGB3P05106 788 aa22.12■■□□□ 1.13
COPS7A-208ENST00000538410 SKILP12757 684 aa22.12■■□□□ 1.13
COPS7A-208ENST00000538410 ATP2A2P16615 1042 aaKnown RBP22.12■■□□□ 1.13
COPS7A-208ENST00000538410 MYL6P60660 151 aa22.12■■□□□ 1.13
COPS7A-208ENST00000538410 SGSM1Q2NKQ1 1148 aa22.12■■□□□ 1.13
COPS7A-208ENST00000538410 SFMBT2Q5VUG0 894 aa22.12■■□□□ 1.13
COPS7A-208ENST00000538410 ZNF598Q86UK7 904 aaKnown RBP22.12■■□□□ 1.13
COPS7A-208ENST00000538410 PPM1KQ8N3J5 372 aa22.12■■□□□ 1.13
COPS7A-208ENST00000538410 BEST2Q8NFU1 509 aa22.12■■□□□ 1.13
COPS7A-208ENST00000538410 ELMO3Q96BJ8 720 aa22.12■■□□□ 1.13
COPS7A-208ENST00000538410 FAM81BQ96LP2 452 aa22.12■■□□□ 1.13
COPS7A-208ENST00000538410 ZNHIT6Q9NWK9 470 aaKnown RBP22.12■■□□□ 1.13
COPS7A-208ENST00000538410 UBQLN1Q9UMX0 589 aaKnown RBP22.12■■□□□ 1.13
COPS7A-208ENST00000538410 XPOTO43592 962 aaKnown RBP22.11■■□□□ 1.13
COPS7A-208ENST00000538410 KRT19P08727 400 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 GUCY2FP51841 1108 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 MFAP3P55082 362 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 NOP14P78316 857 aaKnown RBP22.11■■□□□ 1.13
COPS7A-208ENST00000538410 FAM189BP81408 668 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 GCNT1Q02742 428 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 DRAP1Q14919 205 aaPredicted RBP22.11■■□□□ 1.13
COPS7A-208ENST00000538410 MEA1Q16626 185 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 ARHGAP44Q17R89 818 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 E4F1Q66K89 784 aaPredicted RBP22.11■■□□□ 1.13
COPS7A-208ENST00000538410 SPOPLQ6IQ16 392 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 TMEM130Q8N3G9 435 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 MYLIPQ8WY64 445 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 ZFP42Q96MM3 310 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 GPR88Q9GZN0 384 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 APOBEC3GQ9HC16 384 aaKnown RBP22.11■■□□□ 1.13
COPS7A-208ENST00000538410 UBN1Q9NPG3 1134 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 RNF19AQ9NV58 838 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 AIPL1Q9NZN9 384 aa22.11■■□□□ 1.13
COPS7A-208ENST00000538410 PTGESO14684 152 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 BAIAP3O94812 1187 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 EOMESO95936 686 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 MLH1P40692 756 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 RABGGTBP53611 331 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 GRIN2CQ14957 1233 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 ENOSF1Q7L5Y1 443 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 RNF169Q8NCN4 708 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 TAF4BQ92750 862 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 C18orf25Q96B23 403 aaPredicted RBP22.1■■□□□ 1.13
COPS7A-208ENST00000538410 KREMEN1Q96MU8 473 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 SLC9A7Q96T83 725 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 GAD1Q99259 594 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 XYLT2Q9H1B5 865 aa22.1■■□□□ 1.13
COPS7A-208ENST00000538410 RSAD1Q9HA92 442 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms