RNA–Protein interactions for RNA: ENST00000536823.5

YBX3-206, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 840 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-206ENST00000536823 FAM13BQ9NYF5 915 aa7.85□□□□□ -1.15
YBX3-206ENST00000536823 RGL1Q9NZL6 768 aa7.85□□□□□ -1.15
YBX3-206ENST00000536823 MRPL42Q9Y6G3 142 aaKnown RBP7.85□□□□□ -1.15
YBX3-206ENST00000536823 ATG2AQ2TAZ0 1938 aa7.85□□□□□ -1.15
YBX3-206ENST00000536823 FNDC1Q4ZHG4 1894 aaPredicted RBP7.85□□□□□ -1.15
YBX3-206ENST00000536823 BIN1O00499 593 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 LYPLA2O95372 231 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 IBSPP21815 317 aaPredicted RBP7.84□□□□□ -1.15
YBX3-206ENST00000536823 GATMP50440 423 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 NPEPPSP55786 919 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 NLRP12P59046 1061 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 FAM189BP81408 668 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 MRPS5P82675 430 aaKnown RBP7.84□□□□□ -1.15
YBX3-206ENST00000536823 CDC42EP1Q00587 391 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 CYP4A11Q02928 519 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 ORC2Q13416 577 aaPredicted RBP7.84□□□□□ -1.15
YBX3-206ENST00000536823 PTPROQ16827 1216 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 PAN2Q504Q3 1202 aaKnown RBP7.84□□□□□ -1.15
YBX3-206ENST00000536823 ZNF410Q86VK4 478 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 NOSTRINQ8IVI9 506 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 EXOC8Q8IYI6 725 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 GJD3Q8N144 294 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 FAM184AQ8NB25 1140 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 SLC7A3Q8WY07 619 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 CEP170P1Q96L14 293 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 TBC1D32Q96NH3 1257 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 ASB2Q96Q27 587 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 MTMR9Q96QG7 549 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 FAM129BQ96TA1 746 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 EIF2AK1Q9BQI3 630 aaKnown RBP7.84□□□□□ -1.15
YBX3-206ENST00000536823 GCOM2Q9BZD3 368 aaPredicted RBP7.84□□□□□ -1.15
YBX3-206ENST00000536823 TMEM60Q9H2L4 133 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 DHX33Q9H6R0 707 aaKnown RBP7.84□□□□□ -1.15
YBX3-206ENST00000536823 ELAC1Q9H777 363 aaKnown RBP7.84□□□□□ -1.15
YBX3-206ENST00000536823 ZSWIM4Q9H7M6 989 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 TTC12Q9H892 705 aaPredicted RBP7.84□□□□□ -1.15
YBX3-206ENST00000536823 RGS18Q9NS28 235 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 TMEM161AQ9NX61 479 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 SUCLA2Q9P2R7 463 aaPredicted RBP7.84□□□□□ -1.15
YBX3-206ENST00000536823 PCDHA12Q9UN75 941 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 COG5Q9UP83 839 aa7.84□□□□□ -1.15
YBX3-206ENST00000536823 A0A087WZ62 844 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 ANKRD33BA6NCL7 494 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 PDGFAP04085 211 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 ATP2B1P20020 1258 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 FGFR4P22455 802 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 SFPQP23246 707 aaKnown RBP eCLIP7.83□□□□□ -1.16
YBX3-206ENST00000536823 YWHABP31946 246 aaKnown RBP7.83□□□□□ -1.16
YBX3-206ENST00000536823 MCM7P33993 719 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 TRAPPC10P48553 1259 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 POLGP54098 1239 aaPredicted RBP7.83□□□□□ -1.16
YBX3-206ENST00000536823 TFF2Q03403 129 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 GNL2Q13823 731 aaKnown RBP7.83□□□□□ -1.16
YBX3-206ENST00000536823 CTTNQ14247 550 aaKnown RBP7.83□□□□□ -1.16
YBX3-206ENST00000536823 EMC2Q15006 297 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 NFKBIBQ15653 356 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 AAK1Q2M2I8 961 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 TTC38Q5R3I4 469 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 OTUD6AQ7L8S5 288 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 ATCAYQ86WG3 371 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 ECHDC2Q86YB7 292 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 RHPN2Q8IUC4 686 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 KSR1Q8IVT5 923 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 PSPC1Q8WXF1 523 aaKnown RBP7.83□□□□□ -1.16
YBX3-206ENST00000536823 P2RX5Q93086 422 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 HSD17B14Q9BPX1 270 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 FDXACB1Q9BRP7 624 aaPredicted RBP7.83□□□□□ -1.16
YBX3-206ENST00000536823 LMAN2LQ9H0V9 348 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 ATP6V0A4Q9HBG4 840 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 RNF19AQ9NV58 838 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 KIF3AQ9Y496 699 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 PCDHB7Q9Y5E2 793 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 COL4A3BPQ9Y5P4 624 aa7.83□□□□□ -1.16
YBX3-206ENST00000536823 TCF20Q9UGU0 1960 aaKnown RBP7.82□□□□□ -1.16
YBX3-206ENST00000536823 TBKBP1A7MCY6 615 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 H3BRJ5 948 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 GRM6O15303 877 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 CSDE1O75534 798 aaKnown RBP7.82□□□□□ -1.16
YBX3-206ENST00000536823 SLITRK3O94933 977 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 RPLP1P05386 114 aaKnown RBP7.82□□□□□ -1.16
YBX3-206ENST00000536823 OR52Z1P0C646 297 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 FGFR1P11362 822 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 ZSCAN20P17040 1043 aaPredicted RBP7.82□□□□□ -1.16
YBX3-206ENST00000536823 ATF7P17544 494 aaPredicted RBP7.82□□□□□ -1.16
YBX3-206ENST00000536823 U2AF2P26368 475 aaKnown RBP eCLIP7.82□□□□□ -1.167e-9■□□□□ 10.4
YBX3-206ENST00000536823 MCM2P49736 904 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 TRIP4Q15650 581 aaPredicted RBP7.82□□□□□ -1.16
YBX3-206ENST00000536823 NAALADL2Q58DX5 795 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 XKR9Q5GH70 373 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 TCEAL5Q5H9L2 206 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 PAOXQ6QHF9 649 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 TMC7Q7Z402 723 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 TPH2Q8IWU9 490 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 TCP11Q8WWU5 503 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 TMEM143Q96AN5 459 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 ALKBH8Q96BT7 664 aaKnown RBP7.82□□□□□ -1.16
YBX3-206ENST00000536823 TMX3Q96JJ7 454 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 DMRTB1Q96MA1 342 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 NLRP4Q96MN2 994 aa7.82□□□□□ -1.16
YBX3-206ENST00000536823 CCDC43Q96MW1 224 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms