RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 MAGEA10P43363 369 aaPredicted RBP12.4□□□□□ -0.43
CDCA3-206ENST00000536241 CLCNKBP51801 687 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 POLR2FP61218 127 aaKnown RBP12.4□□□□□ -0.43
CDCA3-206ENST00000536241 RNASELQ05823 741 aaKnown RBP12.4□□□□□ -0.43
CDCA3-206ENST00000536241 TBX2Q13207 712 aaPredicted RBP12.4□□□□□ -0.43
CDCA3-206ENST00000536241 PAN2Q504Q3 1202 aaKnown RBP12.4□□□□□ -0.43
CDCA3-206ENST00000536241 PPFIBP1Q86W92 1011 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 ARHGEF19Q8IW93 802 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 CCDC150Q8NCX0 1101 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 HERVK_113Q902F9 699 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 HPDLQ96IR7 371 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 FAM193BQ96PV7 902 aaPredicted RBP12.4□□□□□ -0.43
CDCA3-206ENST00000536241 PAAF1Q9BRP4 392 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 XYLT2Q9H1B5 865 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 GANQ9H2C0 597 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 APOBEC3GQ9HC16 384 aaKnown RBP12.4□□□□□ -0.43
CDCA3-206ENST00000536241 NLRC4Q9NPP4 1024 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 DNAJC12Q9UKB3 198 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 NUB1Q9Y5A7 615 aa12.4□□□□□ -0.43
CDCA3-206ENST00000536241 B4GALT3O60512 393 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 ZC3H11AO75152 810 aaKnown RBP eCLIP12.39□□□□□ -0.43
CDCA3-206ENST00000536241 CLSTN1O94985 981 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 ASS1P00966 412 aaKnown RBP12.39□□□□□ -0.43
CDCA3-206ENST00000536241 GYPCP04921 128 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 UCHL3P15374 230 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 ATICP31939 592 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 CASP14P31944 242 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 GOLGA8FQ08AF8 430 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 GOLGA8DPQ0D2H9 430 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 TUSC3Q13454 348 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 ZNF699Q32M78 642 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 WDR72Q3MJ13 1102 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 COLGALT2Q8IYK4 626 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 KAT5Q92993 513 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 ZNF689Q96CS4 500 aaPredicted RBP12.39□□□□□ -0.43
CDCA3-206ENST00000536241 PDLIM2Q96JY6 352 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 NT5C1BQ96P26 610 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 IMPG2Q9BZV3 1241 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 TTYH3Q9C0H2 523 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 NRDE2Q9H7Z3 1164 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 HCSTQ9UBK5 93 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 APEX2Q9UBZ4 518 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 DNAJB4Q9UDY4 337 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 AJAP1Q9UKB5 411 aaPredicted RBP12.39□□□□□ -0.43
CDCA3-206ENST00000536241 FHOD1Q9Y613 1164 aa12.39□□□□□ -0.43
CDCA3-206ENST00000536241 PDCD11Q14690 1871 aaKnown RBP12.38□□□□□ -0.43
CDCA3-206ENST00000536241 RALGAPA2Q2PPJ7 1873 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 TDRD15B5MCY1 1934 aaKnown RBP12.38□□□□□ -0.43
CDCA3-206ENST00000536241 SCN1AP35498 2009 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 LTBP2Q14767 1821 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 PODXLO00592 558 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 RPL9P32969 192 aaKnown RBP12.38□□□□□ -0.43
CDCA3-206ENST00000536241 FXR1P51114 621 aaKnown RBP eCLIP12.38□□□□□ -0.43
CDCA3-206ENST00000536241 ADKP55263 362 aaKnown RBP12.38□□□□□ -0.43
CDCA3-206ENST00000536241 NOP14P78316 857 aaKnown RBP12.38□□□□□ -0.43
CDCA3-206ENST00000536241 DSC1Q08554 894 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 MYO1EQ12965 1108 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 UPP1Q16831 310 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 ARHGAP44Q17R89 818 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 FIGNQ5HY92 759 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 ZNF667Q5HYK9 610 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 C9orf50Q5SZB4 431 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 IQCEQ6IPM2 695 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 PPM1KQ8N3J5 372 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 TAF4BQ92750 862 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 DDX27Q96GQ7 796 aaKnown RBP12.38□□□□□ -0.43
CDCA3-206ENST00000536241 IMPACTQ9P2X3 320 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 NXF1Q9UBU9 619 aaKnown RBP12.38□□□□□ -0.43
CDCA3-206ENST00000536241 CAPN11Q9UMQ6 739 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 POLIQ9UNA4 740 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 SLC4A7Q9Y6M7 1214 aa12.38□□□□□ -0.43
CDCA3-206ENST00000536241 KPNA7A9QM74 516 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 SPTLC1O15269 473 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 B3GAT3O94766 335 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 ALDH2P05091 517 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 OR1G1P47890 313 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 LILRA4P59901 499 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 RAPGEF1Q13905 1077 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 DRAP1Q14919 205 aaPredicted RBP12.37□□□□□ -0.43
CDCA3-206ENST00000536241 SHHQ15465 462 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 DCLRE1AQ6PJP8 1040 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 CCDC186Q7Z3E2 898 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 CACNA2D4Q7Z3S7 1137 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 LRRC52Q8N7C0 313 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 C3orf58Q8NDZ4 430 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 KREMEN1Q96MU8 473 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 ZBED2Q9BTP6 218 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 NAA15Q9BXJ9 866 aaKnown RBP12.37□□□□□ -0.43
CDCA3-206ENST00000536241 MRPL9Q9BYD2 267 aaKnown RBP12.37□□□□□ -0.43
CDCA3-206ENST00000536241 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 CEP72Q9P209 647 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 FBXL5Q9UKA1 691 aa12.37□□□□□ -0.43
CDCA3-206ENST00000536241 LUC7L2Q9Y383 392 aaKnown RBP12.37□□□□□ -0.43
CDCA3-206ENST00000536241 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.37□□□□□ -0.43
CDCA3-206ENST00000536241 FNDC1Q4ZHG4 1894 aaPredicted RBP12.37□□□□□ -0.43
CDCA3-206ENST00000536241 A0A1W2PQJ5 194 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 NT5C1B-RDH14C9J2C7 533 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 AKR1B15C9JRZ8 316 aaPredicted RBP12.36□□□□□ -0.43
CDCA3-206ENST00000536241 F8W810 466 aa12.36□□□□□ -0.43
CDCA3-206ENST00000536241 H0YGN5 161 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms