RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 TARS2Q9BW92 718 aaKnown RBP14.18□□□□□ -0.14
TNFRSF1A-207ENST00000535958 TMEM134Q9H6X4 195 aa14.18□□□□□ -0.14
TNFRSF1A-207ENST00000535958 PRMT8Q9NR22 394 aaPredicted RBP14.18□□□□□ -0.14
TNFRSF1A-207ENST00000535958 CNTN3Q9P232 1028 aa14.18□□□□□ -0.14
TNFRSF1A-207ENST00000535958 FBXL5Q9UKA1 691 aa14.18□□□□□ -0.14
TNFRSF1A-207ENST00000535958 DMXL1Q9Y485 3027 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 ZNF263O14978 683 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 KCNE1P15382 129 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 IGFBP6P24592 240 aaPredicted RBP14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 CCR3P51677 355 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 SMTNP53814 917 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 TWF1Q12792 350 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 PLD1Q13393 1074 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 NOLC1Q14978 699 aaKnown RBP eCLIP14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 ZRSR1Q15695 479 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 ECM1Q16610 540 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 XKR4Q5GH76 650 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 PRSS36Q5K4E3 855 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 FAM200AQ8TCP9 573 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 FAM3CQ92520 227 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 SMARCD2Q92925 531 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 TCEAL4Q96EI5 215 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 ASB16Q96NS5 453 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 LLPHQ9BRT6 129 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 C17orf75Q9HAS0 396 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 AFF4Q9UHB7 1163 aaKnown RBP14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 KCNG1Q9UIX4 513 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 MAFFQ9ULX9 164 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 PIAS3Q9Y6X2 628 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 CITO14578 2027 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 NOTCH4Q99466 2003 aa14.17□□□□□ -0.14
TNFRSF1A-207ENST00000535958 WDR87Q6ZQQ6 2873 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 E9PMD0 336 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 FCARP24071 287 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 LRRC32Q14392 662 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 PDIA5Q14554 519 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 CD300LGQ6UXG3 332 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 ALKAL1Q6UXT8 129 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 PRR23BQ6ZRT6 265 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 USP37Q86T82 979 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 DDX12PQ92771 950 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 E2F7Q96AV8 911 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 C18orf25Q96B23 403 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 BICD1Q96G01 975 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 SUSD3Q96L08 255 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 ZMAT2Q96NC0 199 aaKnown RBP14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 TBC1D32Q96NH3 1257 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 TIPINQ9BVW5 301 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 GPR88Q9GZN0 384 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 CHRDQ9H2X0 955 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 ZNF334Q9HCZ1 680 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 ARHGAP28Q9P2N2 729 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 LIMCH1Q9UPQ0 1083 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 CEP250Q9BV73 2442 aa14.16□□□□□ -0.14
TNFRSF1A-207ENST00000535958 LAD1O00515 517 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 SLC16A4O15374 487 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 XPOTO43592 962 aaKnown RBP14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 LILRB5O75023 590 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 TOM1L1O75674 476 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 SEC24AO95486 1093 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 YWHAHQ04917 246 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 NBR1Q14596 966 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 C1orf228Q6PIY5 440 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 VITQ6UXI7 678 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 DTHD1Q6ZMT9 781 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 IGSF22Q8N9C0 903 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 FBXO18Q8NFZ0 1043 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 ZSCAN18Q8TBC5 510 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 MSANTD3Q96H12 275 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 CDK5RAP3Q96JB5 506 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 OXCT2Q9BYC2 517 aaPredicted RBP14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 LMAN1LQ9HAT1 526 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 PTPRHQ9HD43 1115 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 PCDHB8Q9UN66 801 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 YIPF1Q9Y548 306 aa14.15□□□□□ -0.14
TNFRSF1A-207ENST00000535958 TICRRQ7Z2Z1 1910 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 H0YCG3 227 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 DPYSL4O14531 572 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 CLDN3O15551 220 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 PROZP22891 400 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 CCR2P41597 374 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 ALDH1A3P47895 512 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 KPNA1P52294 538 aaPredicted RBP14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 EPHB3P54753 998 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 PPP2R3AQ06190 1150 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 RAD51AP2Q09MP3 1159 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 ST3GAL1Q11201 340 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 PTGDRQ13258 359 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 TEAD2Q15562 447 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 LPAL2Q16609 132 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 LAIR1Q6GTX8 287 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 RINT1Q6NUQ1 792 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 DSTYKQ6XUX3 929 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 MFSD6LQ8IWD5 586 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 HS6ST3Q8IZP7 471 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 NELL1Q92832 810 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 KIF12Q96FN5 646 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 RTKNQ9BST9 563 aa14.14□□□□□ -0.15
TNFRSF1A-207ENST00000535958 RUSC1Q9BVN2 902 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms