RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 DACT2Q5SW24 774 aa6.29□□□□□ -1.4
VBP1-203ENST00000535916 SRRM1Q8IYB3 904 aaKnown RBP6.29□□□□□ -1.4
VBP1-203ENST00000535916 NRG4Q8WWG1 115 aa6.29□□□□□ -1.4
VBP1-203ENST00000535916 RAB24Q969Q5 203 aa6.29□□□□□ -1.4
VBP1-203ENST00000535916 C7orf25Q9BPX7 421 aa6.29□□□□□ -1.4
VBP1-203ENST00000535916 TLR10Q9BXR5 811 aa6.29□□□□□ -1.4
VBP1-203ENST00000535916 C11orf54Q9H0W9 315 aaPredicted RBP6.29□□□□□ -1.4
VBP1-203ENST00000535916 HAUS5O94927 633 aa6.28□□□□□ -1.4
VBP1-203ENST00000535916 AGXTP21549 392 aa6.28□□□□□ -1.4
VBP1-203ENST00000535916 FOLR3P41439 243 aa6.28□□□□□ -1.4
VBP1-203ENST00000535916 PROK1P58294 105 aa6.28□□□□□ -1.4
VBP1-203ENST00000535916 AKNAD1Q5T1N1 836 aa6.28□□□□□ -1.4
VBP1-203ENST00000535916 KIAA0895LQ68EN5 471 aa6.28□□□□□ -1.4
VBP1-203ENST00000535916 SPATS2Q86XZ4 545 aaKnown RBP6.28□□□□□ -1.4
VBP1-203ENST00000535916 RHOT1Q8IXI2 618 aa6.28□□□□□ -1.4
VBP1-203ENST00000535916 WDR66Q8TBY9 1149 aa6.28□□□□□ -1.4
VBP1-203ENST00000535916 TMEM125Q96AQ2 219 aa6.28□□□□□ -1.4
VBP1-203ENST00000535916 ZNF277Q9NRM2 450 aaPredicted RBP6.28□□□□□ -1.4
VBP1-203ENST00000535916 VSX1Q9NZR4 365 aaPredicted RBP6.28□□□□□ -1.4
VBP1-203ENST00000535916 ARPP21Q9UBL0 812 aaPredicted RBP6.28□□□□□ -1.4
VBP1-203ENST00000535916 TLDC2A0PJX2 215 aa6.27□□□□□ -1.41
VBP1-203ENST00000535916 YY2O15391 372 aa6.27□□□□□ -1.41
VBP1-203ENST00000535916 PROP1O75360 226 aa6.27□□□□□ -1.41
VBP1-203ENST00000535916 CPEP16870 476 aa6.27□□□□□ -1.41
VBP1-203ENST00000535916 HSD3B2P26439 372 aa6.27□□□□□ -1.41
VBP1-203ENST00000535916 CTXN1P60606 82 aa6.27□□□□□ -1.41
VBP1-203ENST00000535916 VWA1Q6PCB0 445 aa6.27□□□□□ -1.41
VBP1-203ENST00000535916 PPM1NQ8N819 430 aa6.27□□□□□ -1.41
VBP1-203ENST00000535916 UROC1Q96N76 676 aa6.27□□□□□ -1.41
VBP1-203ENST00000535916 INTUQ9ULD6 942 aa6.27□□□□□ -1.41
VBP1-203ENST00000535916 WASHC2AQ641Q2 1341 aa6.26□□□□□ -1.41
VBP1-203ENST00000535916 A0A1W2PS29 197 aa6.26□□□□□ -1.41
VBP1-203ENST00000535916 SBK3P0C264 359 aa6.26□□□□□ -1.41
VBP1-203ENST00000535916 MAPK10P53779 464 aa6.26□□□□□ -1.41
VBP1-203ENST00000535916 PEG10Q86TG7 708 aaKnown RBP6.26□□□□□ -1.41
VBP1-203ENST00000535916 SH2D3CQ8N5H7 860 aa6.26□□□□□ -1.41
VBP1-203ENST00000535916 NLGN4YQ8NFZ3 816 aaPredicted RBP6.26□□□□□ -1.41
VBP1-203ENST00000535916 CDYLQ9Y232 598 aa6.26□□□□□ -1.41
VBP1-203ENST00000535916 PRAMEF33A0A0G2JMD5 474 aa6.25□□□□□ -1.41
VBP1-203ENST00000535916 PRAMEF10O60809 474 aa6.25□□□□□ -1.41
VBP1-203ENST00000535916 AGFG2O95081 481 aa6.25□□□□□ -1.41
VBP1-203ENST00000535916 SRGNP10124 158 aa6.25□□□□□ -1.41
VBP1-203ENST00000535916 ABCG1P45844 678 aa6.25□□□□□ -1.41
VBP1-203ENST00000535916 TARDBPQ13148 414 aaKnown RBP eCLIP6.25□□□□□ -1.41
VBP1-203ENST00000535916 ATP2B3Q16720 1220 aa6.25□□□□□ -1.41
VBP1-203ENST00000535916 ZNF788Q6ZQV5 615 aa6.25□□□□□ -1.41
VBP1-203ENST00000535916 SLC30A5Q8TAD4 765 aa6.25□□□□□ -1.41
VBP1-203ENST00000535916 TFAP2BQ92481 460 aa6.25□□□□□ -1.41
VBP1-203ENST00000535916 TMX3Q96JJ7 454 aa6.25□□□□□ -1.41
VBP1-203ENST00000535916 CPNE5Q9HCH3 593 aa6.25□□□□□ -1.41
VBP1-203ENST00000535916 INTS13Q9NVM9 706 aa6.25□□□□□ -1.41
VBP1-203ENST00000535916 COL3A1P02461 1466 aaPredicted RBP6.25□□□□□ -1.41
VBP1-203ENST00000535916 DNAJC9-AS1A6NH13 148 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 GRM6O15303 877 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 KCNA2P16389 499 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 GATA3P23771 443 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 CNGA1P29973 690 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 KAZNQ674X7 775 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 SDE2Q6IQ49 451 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 GIMAP6Q6P9H5 292 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 TSHZ1Q6ZSZ6 1077 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 KRT26Q7Z3Y9 468 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 GRASPQ7Z6J2 395 aaPredicted RBP6.24□□□□□ -1.41
VBP1-203ENST00000535916 CLNKQ7Z7G1 428 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 LPIN2Q92539 896 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 FBXL20Q96IG2 436 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 FAM126AQ9BYI3 521 aaPredicted RBP6.24□□□□□ -1.41
VBP1-203ENST00000535916 CTTNBP2NLQ9P2B4 639 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 RNF7Q9UBF6 113 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 ENTPD2Q9Y5L3 495 aa6.24□□□□□ -1.41
VBP1-203ENST00000535916 CGB1A6NKQ9 187 aa6.23□□□□□ -1.41
VBP1-203ENST00000535916 K7ESF4 209 aa6.23□□□□□ -1.41
VBP1-203ENST00000535916 MPPED1O15442 326 aa6.23□□□□□ -1.41
VBP1-203ENST00000535916 PROM1O43490 865 aa6.23□□□□□ -1.41
VBP1-203ENST00000535916 VIL1P09327 827 aaKnown RBP6.23□□□□□ -1.41
VBP1-203ENST00000535916 ELFN1P0C7U0 828 aa6.23□□□□□ -1.41
VBP1-203ENST00000535916 WASP42768 502 aa6.23□□□□□ -1.41
VBP1-203ENST00000535916 KLF1Q13351 362 aaPredicted RBP6.23□□□□□ -1.41
VBP1-203ENST00000535916 CD300EQ496F6 205 aaPredicted RBP6.23□□□□□ -1.41
VBP1-203ENST00000535916 UTP14CQ5TAP6 766 aaKnown RBP6.23□□□□□ -1.41
VBP1-203ENST00000535916 RNF219Q5W0B1 726 aaPredicted RBP6.23□□□□□ -1.41
VBP1-203ENST00000535916 RSPH3Q86UC2 560 aa6.23□□□□□ -1.41
VBP1-203ENST00000535916 AMOTL1Q8IY63 956 aa6.23□□□□□ -1.41
VBP1-203ENST00000535916 ANKS1AQ92625 1134 aa6.23□□□□□ -1.41
VBP1-203ENST00000535916 TIMP4Q99727 224 aa6.23□□□□□ -1.41
VBP1-203ENST00000535916 KAT6AQ92794 2004 aa6.22□□□□□ -1.41
VBP1-203ENST00000535916 ORC4O43929 436 aa6.22□□□□□ -1.41
VBP1-203ENST00000535916 MTHFD1P11586 935 aaKnown RBP6.22□□□□□ -1.41
VBP1-203ENST00000535916 GRIA3P42263 894 aa6.22□□□□□ -1.41
VBP1-203ENST00000535916 RPS7P62081 194 aaKnown RBP6.22□□□□□ -1.41
VBP1-203ENST00000535916 FPGSQ05932 587 aa6.22□□□□□ -1.41
VBP1-203ENST00000535916 SRSF4Q08170 494 aaKnown RBP6.22□□□□□ -1.41
VBP1-203ENST00000535916 CLUL1Q15846 466 aa6.22□□□□□ -1.41
VBP1-203ENST00000535916 FLYWCH1Q4VC44 716 aa6.22□□□□□ -1.41
VBP1-203ENST00000535916 PABPC1LQ4VXU2 614 aaKnown RBP6.22□□□□□ -1.41
VBP1-203ENST00000535916 TSTD2Q5T7W7 516 aa6.22□□□□□ -1.41
VBP1-203ENST00000535916 NSUN7Q8NE18 718 aaKnown RBP6.22□□□□□ -1.41
VBP1-203ENST00000535916 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.22□□□□□ -1.41
VBP1-203ENST00000535916 TOR1AIP2Q8NFQ8 470 aa6.22□□□□□ -1.41
VBP1-203ENST00000535916 IFI44Q8TCB0 444 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms