RNA–Protein interactions for RNA: ENST00000535810.1

CHD4-204, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2

Gene CHD4, Length 607 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-204ENST00000535810 MATR3P43243 847 aaKnown RBP eCLIP9.64□□□□□ -0.87
CHD4-204ENST00000535810 BRCC3P46736 316 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 PTPN21Q16825 1174 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 ZC2HC1CQ53FD0 456 aaPredicted RBP9.64□□□□□ -0.87
CHD4-204ENST00000535810 PDXDC1Q6P996 788 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 LILRA6Q6PI73 481 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 ELMSAN1Q6PJG2 1045 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 CCDC149Q6ZUS6 474 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 SV2BQ7L1I2 683 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 DYMQ7RTS9 669 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 SFR1Q86XK3 245 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 TDRD5Q8NAT2 981 aaKnown RBP9.64□□□□□ -0.87
CHD4-204ENST00000535810 HDAC7Q8WUI4 952 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 EDAQ92838 391 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 ZNF707Q96C28 371 aaPredicted RBP9.64□□□□□ -0.87
CHD4-204ENST00000535810 DNAJC19Q96DA6 116 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 RHOBTB2Q9BYZ6 727 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 PANK2Q9BZ23 570 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 PLEKHA4Q9H4M7 779 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 PLEKHA5Q9HAU0 1116 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 TFIP11Q9UBB9 837 aaKnown RBP9.64□□□□□ -0.87
CHD4-204ENST00000535810 MTRRQ9UBK8 725 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 USTQ9Y2C2 406 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 C2orf16Q68DN1 1984 aa9.64□□□□□ -0.87
CHD4-204ENST00000535810 PDCD11Q14690 1871 aaKnown RBP9.64□□□□□ -0.87
CHD4-204ENST00000535810 CCDC195A0A1B0GUA6 201 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 FRMD3A2A2Y4 597 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 TISP43B9A030 160 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 OGTO15294 1046 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 TRAPPC3O43617 180 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 GAP43P17677 238 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 RPL9P32969 192 aaKnown RBP9.63□□□□□ -0.87
CHD4-204ENST00000535810 ZXDAP98168 799 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 PPP2R3AQ06190 1150 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 SPAG1Q07617 926 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 ENOX2Q16206 610 aaKnown RBP9.63□□□□□ -0.87
CHD4-204ENST00000535810 KYAT1Q16773 422 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 FOXD4L6Q3SYB3 417 aaPredicted RBP9.63□□□□□ -0.87
CHD4-204ENST00000535810 CYP26C1Q6V0L0 522 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 FOXD4L3Q6VB84 417 aaPredicted RBP9.63□□□□□ -0.87
CHD4-204ENST00000535810 ZNF720Q7Z2F6 126 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 TMEM130Q8N3G9 435 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 PDILTQ8N807 584 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 KREMEN2Q8NCW0 462 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 MSTO1Q9BUK6 570 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 STRA6Q9BX79 667 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 IRF2BPLQ9H1B7 796 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 IKZF4Q9H2S9 585 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 KDM4CQ9H3R0 1056 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 ZDHHC7Q9NXF8 308 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 SEL1LQ9UBV2 794 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 FBXW11Q9UKB1 542 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 BACE2Q9Y5Z0 518 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 CDY1Q9Y6F8 540 aa9.63□□□□□ -0.87
CHD4-204ENST00000535810 RIF1Q5UIP0 2472 aaKnown RBP9.62□□□□□ -0.87
CHD4-204ENST00000535810 CLUHO75153 1309 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 LACTBL1A8MY62 500 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 ANKRD63C9JTQ0 380 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 SYN3O14994 580 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 ADRB2P07550 413 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 LRPAP1P30533 357 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 CASP5P51878 434 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 KCNA1Q09470 495 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 TCF15Q12870 199 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 RAB33AQ14088 237 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 ZBTB6Q15916 424 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 VARS2Q5ST30 1063 aaKnown RBP9.62□□□□□ -0.87
CHD4-204ENST00000535810 AXDND1Q5T1B0 1012 aaPredicted RBP9.62□□□□□ -0.87
CHD4-204ENST00000535810 LIN9Q5TKA1 542 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 SHC4Q6S5L8 630 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 RSPO2Q6UXX9 243 aaPredicted RBP9.62□□□□□ -0.87
CHD4-204ENST00000535810 TRIM67Q6ZTA4 783 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 ANKS3Q6ZW76 656 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 OTOP3Q7RTS5 596 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 ZDHHC14Q8IZN3 488 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 KCNG4Q8TDN1 519 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 SMG7Q92540 1137 aaKnown RBP9.62□□□□□ -0.87
CHD4-204ENST00000535810 HVCN1Q96D96 273 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 FGFBP2Q9BYJ0 223 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 TNMDQ9H2S6 317 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 MRPL44Q9H9J2 332 aaKnown RBP9.62□□□□□ -0.87
CHD4-204ENST00000535810 WDR6Q9NNW5 1121 aaKnown RBP9.62□□□□□ -0.87
CHD4-204ENST00000535810 OLFML3Q9NRN5 406 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 TBC1D7Q9P0N9 293 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 CPSF3Q9UKF6 684 aaKnown RBP9.62□□□□□ -0.87
CHD4-204ENST00000535810 UBQLN1Q9UMX0 589 aaKnown RBP9.62□□□□□ -0.87
CHD4-204ENST00000535810 NUB1Q9Y5A7 615 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 STYXL1Q9Y6J8 313 aa9.62□□□□□ -0.87
CHD4-204ENST00000535810 MTCL1Q9Y4B5 1905 aaKnown RBP9.61□□□□□ -0.87
CHD4-204ENST00000535810 MYO10Q9HD67 2058 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 TMEM221A6NGB7 291 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 M0R296 226 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 TBC1D4O60343 1298 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 CUTAO60888 179 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 N4BP1O75113 896 aaKnown RBP9.61□□□□□ -0.87
CHD4-204ENST00000535810 ASGR2P07307 311 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 C8AP07357 584 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 NFICP08651 508 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 IDEP14735 1019 aa9.61□□□□□ -0.87
CHD4-204ENST00000535810 CYP3A5P20815 502 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms