RNA–Protein interactions for RNA: ENST00000535668.1

CLSTN3-206, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-206ENST00000535668 DDX19AQ9NUU7 478 aaKnown RBP12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 HCFC1R1Q9NWW0 138 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 FBXL5Q9UKA1 691 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 NOL7Q9UMY1 257 aaKnown RBP12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 R4GN57 208 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 COL4A2P08572 1712 aa12.28□□□□□ -0.44
CLSTN3-206ENST00000535668 TTC26A0AVF1 554 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 FAM170BA6NMN3 283 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 STK25O00506 426 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 KINO60870 393 aaKnown RBP12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 MOSPD3O75425 235 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 RFX1P22670 979 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 TGM1P22735 817 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 HOXA6P31267 233 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 IL17AQ16552 155 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 KYAT1Q16773 422 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 SLC10A6Q3KNW5 377 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 KRT79Q5XKE5 535 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 ARL6IP4Q66PJ3 421 aaKnown RBP12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 CEP120Q8N960 986 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 APPL2Q8NEU8 664 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 DEPDC1BQ8WUY9 529 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 SMARCD2Q92925 531 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 IRF7Q92985 503 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 KIF2CQ99661 725 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 LRRC3Q9BY71 257 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 CHRDQ9H2X0 955 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 PPP4R2Q9NY27 417 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 USP20Q9Y2K6 914 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 MTF2Q9Y483 593 aaPredicted RBP12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 INSL5Q9Y5Q6 135 aa12.27□□□□□ -0.45
CLSTN3-206ENST00000535668 PDCD11Q14690 1871 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 H0YCG3 227 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 LAMTOR5O43504 91 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 FAM189A1O60320 539 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 LRP3O75074 770 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 HIP1RO75146 1068 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 SEC24AO95486 1093 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 PIGRP01833 764 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 MYBP10242 640 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 MAPTP10636 758 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 PLS3P13797 630 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 PSMC3P17980 439 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 TARSP26639 723 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 CDC25AP30304 524 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 BRCC3P46736 316 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 PEX3P56589 373 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 ATP2C1P98194 919 aaPredicted RBP12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 FCHO2Q0JRZ9 810 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 ZNF568Q3ZCX4 644 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 RILPL1Q5EBL4 403 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 FAM78AQ5JUQ0 283 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 GLRA4Q5JXX5 417 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 TANGO2Q6ICL3 276 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 SYT2Q8N9I0 419 aaPredicted RBP12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 SNX29Q8TEQ0 813 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 TARS2Q9BW92 718 aaKnown RBP12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 PLA2G2FQ9BZM2 168 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 GOLGA2P5Q9HBQ8 144 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 ZFP14Q9HCL3 533 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 KMT5AQ9NQR1 393 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 OBP2AQ9NY56 170 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 PCDHB8Q9UN66 801 aa12.26□□□□□ -0.45
CLSTN3-206ENST00000535668 SOBPA7XYQ1 873 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 PRR5-ARHGAP8B1AHC4 643 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 LRRN2O75325 713 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 LRG1P02750 347 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 CLTAP09496 248 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 TYMPP19971 482 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 ELF1P32519 619 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 ABCD1P33897 745 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 CCR2P41597 374 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 ZNF131P52739 623 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 SMTNP53814 917 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 NRLP54845 237 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 SLC12A3P55017 1021 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 ARHGAP8P85298 464 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 GPR17Q13304 367 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 NOLC1Q14978 699 aaKnown RBP eCLIP12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 TMEM132AQ24JP5 1023 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 SPECC1Q5M775 1068 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 ZNF280DQ6N043 979 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 MFSD6LQ8IWD5 586 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 DDX12PQ92771 950 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 KXD1Q9BQD3 176 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 RUSC1Q9BVN2 902 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 TRMT61BQ9BVS5 477 aaKnown RBP12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 CEP72Q9P209 647 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 ASB3Q9Y575 518 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 PCDHB6Q9Y5E3 794 aa12.25□□□□□ -0.45
CLSTN3-206ENST00000535668 CEP295Q9C0D2 2601 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 OR6C75A6NL08 312 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 CCDC169A6NNP5 214 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 E9PMD0 336 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 VNN2O95498 520 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 CEBPBP17676 345 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 NCKAP1LP55160 1127 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 MYBPC2Q14324 1141 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 CYP4A22Q5TCH4 519 aa12.24□□□□□ -0.45
CLSTN3-206ENST00000535668 DTHD1Q6ZMT9 781 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms