RNA–Protein interactions for RNA: ENST00000535493.5

HDAC4-214, Transcript of histone deacetylase 4, humanhuman

TSL 2

Gene HDAC4, Length 2,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-214ENST00000535493 NGLY1Q96IV0 654 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 UVRAGQ9P2Y5 699 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 SAE1Q9UBE0 346 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-214ENST00000535493 ADGRA3Q8IWK6 1321 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 SORBS3O60504 671 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 RFX1P22670 979 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 CALB2P22676 271 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 CTCFP49711 727 aaPredicted RBP14.22□□□□□ -0.13
HDAC4-214ENST00000535493 UGCGQ16739 394 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 SYCP2LQ5T4T6 812 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 SCARA3Q6AZY7 606 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 TRABD2AQ86V40 505 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 ANKRD35Q8N283 1001 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 TEKT3Q9BXF9 490 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 HOMER2Q9NSB8 354 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 TXLNGQ9NUQ3 528 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 DNPEPQ9ULA0 475 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 SCAF8Q9UPN6 1271 aaKnown RBP14.22□□□□□ -0.13
HDAC4-214ENST00000535493 SUGT1Q9Y2Z0 365 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 NEU2Q9Y3R4 380 aa14.22□□□□□ -0.13
HDAC4-214ENST00000535493 PLS3P13797 630 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 RARRES1P49788 294 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 KHDC1Q4VXA5 237 aaKnown RBP14.21□□□□□ -0.13
HDAC4-214ENST00000535493 SV2AQ7L0J3 742 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 ZBED8Q8IZ13 594 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 CERKQ8TCT0 537 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 UCMAQ8WVF2 138 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 SYT15Q9BQS2 421 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 PLVAPQ9BX97 442 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 KCNH7Q9NS40 1196 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 ZFATQ9P243 1243 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 ZNF148Q9UQR1 794 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 PECAM1P16284 738 aaPredicted RBP14.21□□□□□ -0.13
HDAC4-214ENST00000535493 MOGSQ13724 837 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 CLEC16AQ2KHT3 1053 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 NBPF20Q3BBV1 942 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 KRT39Q6A163 491 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 PPP1R21Q6ZMI0 780 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 MCOLN2Q8IZK6 566 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 DTX3LQ8TDB6 740 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 LRRC8CQ8TDW0 803 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 STK32AQ8WU08 396 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 GMCL1Q96IK5 515 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 RAB3IPQ96QF0 476 aaPredicted RBP14.21□□□□□ -0.13
HDAC4-214ENST00000535493 CCDC77Q9BR77 488 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 MAK16Q9BXY0 300 aaKnown RBP14.21□□□□□ -0.13
HDAC4-214ENST00000535493 OSBPL8Q9BZF1 889 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 RAB20Q9NX57 234 aa14.21□□□□□ -0.13
HDAC4-214ENST00000535493 A0A0G2JND7 137 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 MAPK13O15264 365 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 KRT4P19013 534 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 ATP4AP20648 1035 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 YY1P25490 414 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 CNGA1P29973 690 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 HHIPL2Q6UWX4 724 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 DSTYKQ6XUX3 929 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 OTOAQ7RTW8 1153 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 AGBL1Q96MI9 1066 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 NT5C1BQ96P26 610 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 CSRNP1Q96S65 589 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 LRMDAQ9H2I8 198 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 TMEM206Q9H813 350 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 CYP39A1Q9NYL5 469 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 STK24Q9Y6E0 443 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 USH1CQ9Y6N9 552 aa14.21□□□□□ -0.14
HDAC4-214ENST00000535493 DSG3P32926 999 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 PIK3CAP42336 1068 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 PLCB3Q01970 1234 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 GPS1Q13098 491 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 MAPK6Q16659 721 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 TATDN1Q6P1N9 297 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 LVRNQ6Q4G3 990 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 FBXL13Q8NEE6 735 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 RFWD2Q8NHY2 731 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 MORC4Q8TE76 937 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 SLCO2A1Q92959 643 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 ZNF622Q969S3 477 aaKnown RBP eCLIP14.2□□□□□ -0.14
HDAC4-214ENST00000535493 MIPEPQ99797 713 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 GLIS2Q9BZE0 524 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-214ENST00000535493 EURLQ9NYK6 297 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 COL20A1Q9P218 1284 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 LGALS13Q9UHV8 139 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 CORO1CQ9ULV4 474 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-214ENST00000535493 COL24A1Q17RW2 1714 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 CFAP69A5D8W1 941 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 LGR5O75473 907 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 ADRA1DP25100 572 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 ARSEP51690 589 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 RPL7AP62424 266 aaKnown RBP14.2□□□□□ -0.14
HDAC4-214ENST00000535493 MKRN3Q13064 507 aaKnown RBP14.2□□□□□ -0.14
HDAC4-214ENST00000535493 KLF1Q13351 362 aaPredicted RBP14.2□□□□□ -0.14
HDAC4-214ENST00000535493 TCEAL1Q15170 157 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 TXNRD3NBQ6F5E7 133 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 SMC6Q96SB8 1091 aa14.2□□□□□ -0.14
HDAC4-214ENST00000535493 PIK3CDO00329 1044 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 AP1G2O75843 785 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 SSTR1P30872 391 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 YARSP54577 528 aaKnown RBP14.19□□□□□ -0.14
HDAC4-214ENST00000535493 BIRC2Q13490 618 aa14.19□□□□□ -0.14
HDAC4-214ENST00000535493 SPARCL1Q14515 664 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms