RNA–Protein interactions for RNA: ENST00000535452.5

CLSTN3-205, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-205ENST00000535452 HYIQ5T013 277 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 HAUS6Q7Z4H7 955 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 GPBP1Q86WP2 473 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 METTL23Q86XA0 190 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 NPAS3Q8IXF0 933 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 TCEAL8Q8IYN2 117 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 BEST2Q8NFU1 509 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 FAM200AQ8TCP9 573 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 DDX12PQ92771 950 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 IRF7Q92985 503 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 TMX3Q96JJ7 454 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 SUSD3Q96L08 255 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 TBC1D32Q96NH3 1257 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 GCNAQ96QF7 691 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 MSTO1Q9BUK6 570 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 PTPRHQ9HD43 1115 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 DNMT3BQ9UBC3 853 aaKnown RBP14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 AFF4Q9UHB7 1163 aaKnown RBP14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 PCDHB8Q9UN66 801 aa14.42□□□□□ -0.1
CLSTN3-205ENST00000535452 MTCL1Q9Y4B5 1905 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 KINO60870 393 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 FGF19O95750 216 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 EDN1P05305 212 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 MAPTP10636 758 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 ODC1P11926 461 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 CYP3A5P20815 502 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 PROZP22891 400 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 LONP1P36776 959 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 STARD6P59095 220 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 MCL1Q07820 350 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 ADCY1Q08828 1119 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 SLFN12LQ6IEE8 588 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 ALKAL1Q6UXT8 129 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 TPRG1Q6ZUI0 275 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 ASCL5Q7RTU5 278 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 TMEM161BQ8NDZ6 487 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 ITFG1Q8TB96 612 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 FEZF2Q8TBJ5 459 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 ATRIPQ8WXE1 791 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 E2F7Q96AV8 911 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 ELSPBP1Q96BH3 223 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 TRMT61BQ9BVS5 477 aaKnown RBP14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 OSBPL6Q9BZF3 934 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 AVENQ9NQS1 362 aaPredicted RBP14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 HCFC1R1Q9NWW0 138 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 FBXL5Q9UKA1 691 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 INSL5Q9Y5Q6 135 aa14.41□□□□□ -0.1
CLSTN3-205ENST00000535452 WDR27A2RRH5 827 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 OR6C75A6NL08 312 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 FAM170BA6NMN3 283 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 DPYSL4O14531 572 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 TRAK2O60296 914 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 MICAL2O94851 1124 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 ABLIM3O94929 683 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 CXCL8P10145 99 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 MYL4P12829 197 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 SLC12A3P55017 1021 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 SOX4Q06945 474 aaPredicted RBP14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 TWF1Q12792 350 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 VEPH1Q14D04 833 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 C1orf228Q6PIY5 440 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 ITIH5Q86UX2 942 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 DAW1Q8N136 415 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 THEM5Q8N1Q8 247 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 C3orf58Q8NDZ4 430 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 ST13P5Q8NFI4 369 aaPredicted RBP14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 CSGALNACT1Q8TDX6 532 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 DNASE1L2Q92874 299 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 C18orf25Q96B23 403 aaPredicted RBP14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 FOXQ1Q9C009 403 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 DSEQ9UL01 958 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 EXOC7Q9UPT5 735 aa14.4□□□□□ -0.1
CLSTN3-205ENST00000535452 VPS37CA5D8V6 355 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 OGTO15294 1046 aa14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 CACNB1Q02641 598 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 MAPK7Q13164 816 aa14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 SLC10A6Q3KNW5 377 aa14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 C8orf34Q49A92 452 aa14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 ARHGAP15Q53QZ3 475 aa14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 DEPDC1BQ8WUY9 529 aa14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 ZBTB45Q96K62 511 aaPredicted RBP14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 ZMAT2Q96NC0 199 aaKnown RBP14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 MMTAG2Q9BU76 263 aaKnown RBP14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 CXCL16Q9H2A7 254 aa14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 RAB23Q9ULC3 237 aa14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 TBX20Q9UMR3 447 aa14.39□□□□□ -0.11
CLSTN3-205ENST00000535452 ZNF263O14978 683 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 ID4P47928 161 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 NCKAP1LP55160 1127 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 POSTNQ15063 836 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 IL17AQ16552 155 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 SEZ6Q53EL9 994 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 ADALQ6DHV7 355 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 OVOS1Q6IE37 1185 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 KCNK18Q7Z418 384 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 LARP4BQ92615 738 aaKnown RBP14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 SMARCD2Q92925 531 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 PNMA5Q96PV4 448 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 REEP2Q9BRK0 252 aa14.38□□□□□ -0.11
CLSTN3-205ENST00000535452 RPP25Q9BUL9 199 aaKnown RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms