RNA–Protein interactions for RNA: ENST00000535038.1

TNFRSF1A-206, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 578 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-206ENST00000535038 WDR59Q6PJI9 974 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 LIPIQ6XZB0 460 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 RUFY4Q6ZNE9 571 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 MB21D1Q8N884 522 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 NLGN2Q8NFZ4 835 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TGFBRAP1Q8WUH2 860 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 RNF34Q969K3 372 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 MTMR8Q96EF0 704 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CRAMP1Q96RY5 1269 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CDC23Q9UJX2 597 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 ZNF214Q9UL59 606 aaPredicted RBP6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CAPN11Q9UMQ6 739 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 PPT2Q9UMR5 302 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 ADAMTSL1Q8N6G6 1762 aa6.57□□□□□ -1.36
TNFRSF1A-206ENST00000535038 MYH4Q9Y623 1939 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 ABCB11O95342 1321 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 SPATA31A6Q5VVP1 1343 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CCDC194A0A1B0GVG4 234 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TRIM49BA6NDI0 452 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 PP2D1A8MPX8 630 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 MAP2K7O14733 419 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 PRICKLE3O43900 615 aaPredicted RBP6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TOM1O60784 492 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 BBOX1O75936 387 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 OR52Z1P0C646 297 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TSPY3P0CV98 308 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TSPY8P0CW00 308 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 NCAM1P13591 858 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CCNE1P24864 410 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 HNRNPH3P31942 346 aaKnown RBP6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 PPP1R2P41236 205 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 HERVK_113P62684 666 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 RTP5Q14D33 572 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TMEM119Q4V9L6 283 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 ZNF394Q53GI3 561 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 MIIPQ5JXC2 388 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CYP26C1Q6V0L0 522 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 SRGAP1Q7Z6B7 1085 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 GGNQ86UU5 652 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 MAPKAPK5Q8IW41 473 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 ADGRG2Q8IZP9 1017 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 ZNF444Q8N0Y2 327 aaPredicted RBP6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CNBD1Q8NA66 436 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 ACRBPQ8NEB7 543 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 MNS1Q8NEH6 495 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TBC1D16Q8TBP0 767 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 HNRNPLLQ8WVV9 542 aaKnown RBP6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 UBXN4Q92575 508 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 ALG3Q92685 438 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CEP95Q96GE4 821 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 GPR101Q96P66 508 aaPredicted RBP6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 ERGIC2Q96RQ1 377 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 EYA3Q99504 573 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TRIM9Q9C026 710 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 ANKZF1Q9H8Y5 726 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 ZNF287Q9HBT7 754 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 BLOC1S4Q9NUP1 217 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 USP40Q9NVE5 1235 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TAB2Q9NYJ8 693 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 POLLQ9UGP5 575 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 SUGT1Q9Y2Z0 365 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 PCDHGB7Q9Y5F8 929 aa6.56□□□□□ -1.36
TNFRSF1A-206ENST00000535038 A0A1B0GTL3 188 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 PVALEFA0A1B0GWK0 134 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TTC26A0AVF1 554 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CCDC151A5D8V7 595 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 PSMD14O00487 310 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 SLC26A4O43511 780 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 PDHBP11177 359 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 RFC4P35249 363 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CCT6AP40227 531 aaKnown RBP6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 MC3RP41968 323 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 DNM2P50570 870 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TUBB4BP68371 445 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 HTRA3P83110 453 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 DDR1Q08345 913 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 EFEMP1Q12805 493 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 GRB10Q13322 594 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 PPP2R5DQ14738 602 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 BRD3Q15059 726 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 NONOQ15233 471 aaKnown RBP eCLIP6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TXNRD1Q16881 649 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 WHAMMP3Q1A5X7 153 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 ASPRV1Q53RT3 343 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 HYIQ5T013 277 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 JAKMIP3Q5VZ66 844 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 EEF1DP3Q658K8 133 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CENPPQ6IPU0 288 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TRAPPC11Q7Z392 1133 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 HEATR3Q7Z4Q2 680 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 NEK8Q86SG6 692 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 SAPCD2Q86UD0 394 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CABP7Q86V35 215 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TEX11Q8IYF3 940 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 SLC35F6Q8N357 371 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 KIAA0895Q8NCT3 520 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 OR8K1Q8NGG5 319 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 TBC1D22AQ8WUA7 517 aa6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 CCDC12Q8WUD4 166 aaPredicted RBP6.55□□□□□ -1.36
TNFRSF1A-206ENST00000535038 P2RX5Q93086 422 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms